| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3984 |
|---|
| Symbol | |
|---|
| ID | 8885185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 4253566 |
|---|
| End bp | 4254537 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_003512729 |
|---|
| Protein GI | 291301451 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCG GGACAGACCT CGTAATACAG ACCGAAAGGA AACAGGCACA GATGCGTAAG
TTCCGCACTG CTGTGGTCGC GGGTGTTGCC GTGGCCCTGT TCGCCCTGTC CGCGTGCGCG
GGTCAGGCGT CGAAGGACAA GGAAGAAGCC GACAAGAAGA AGGAAGAAGT CGGCGACTAC
GTCATGGAGC AGGACAAGGA TGTCCCCGAG GGCCTGCTCG CCGACGCGGT GAAGGACGGA
AAGCTCGTCG TCGGTGTCAA GCCCGACCAG CCACTGATCG GCGAGAAGAA GGGCTCCACC
TACGAGGGCT TCGACATCGA GATGGCGAAG CTGCTGGGTA TGCGCCTGTT CGGCAAGGGT
GGCGAGGAGA AGGTCGAGTT CAAGGAGACC ACCTCCGACA ACCGTGAGGC CTTCCTGAAC
TCCGGCGAGG TCGACGTGGT CATCGCCAGC TACAGCATGT ACCCCGACCG CGTGAAGCAG
TTCTCGTTCG CCGGTCCGTA CCTGTTCACC GGTCAGAACG CCCTGGTGTC TGCCGAGAAC
AAGGACATCA AGACCATTGA TGACCTGGCG GGCAAGAAGG TCTGCATCGC CAAGGGCTCG
GGTTCGATCG ACAACCTGAA GAAGGAGAAC CCGAAGGCCA AGATCGAGAC CCGCGCCAAC
TACGGCGACT GTGCCGCCCA GGTCAAGGAC GGCACCTTCG ACGCGGTCAG CACCGACGAG
ACGATCCTGT ACGGCTACAA GAGCCAGGAC AAGGAAGCGT TCCGCATCCT CGACTCCTCG
GAGAACTTCA CCGACGAGCC TTACGGCATC GGCATGAAGA AGGGCAACGA CGCGGCCAAG
GACTACATCA ACGAGATGAT CAAAGCGGCC TACGAGAACG AAGACTGGGA CAAGGCCTTC
GAGCTGACCT TCGGTGCCGC TGGCATGGAG AAGCCGGAGT ACCCCGAAAT CGGCAAGATC
ACCTCTGACT AA
|
|---|
| Protein sequence | MSAGTDLVIQ TERKQAQMRK FRTAVVAGVA VALFALSACA GQASKDKEEA DKKKEEVGDY
VMEQDKDVPE GLLADAVKDG KLVVGVKPDQ PLIGEKKGST YEGFDIEMAK LLGMRLFGKG
GEEKVEFKET TSDNREAFLN SGEVDVVIAS YSMYPDRVKQ FSFAGPYLFT GQNALVSAEN
KDIKTIDDLA GKKVCIAKGS GSIDNLKKEN PKAKIETRAN YGDCAAQVKD GTFDAVSTDE
TILYGYKSQD KEAFRILDSS ENFTDEPYGI GMKKGNDAAK DYINEMIKAA YENEDWDKAF
ELTFGAAGME KPEYPEIGKI TSD
|
|---|
| |