Gene Snas_3967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3967 
Symbol 
ID8885168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4230761 
End bp4233901 
Gene Length3141 bp 
Protein Length1046 aa 
Translation table11 
GC content67% 
IMG OID 
ProductAAA ATPase 
Protein accessionYP_003512712 
Protein GI291301434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAC GGGAACGAAC GATATTGGAG TCACTGCGCT TCGACGCGGC TCCGACCGAG 
AAGACACTGT GGGGCGGGCG GTTGCCGCAT CTGCCGGACC TGAACCAGCA GGTCTACGAC
CGGCTCCGGC ACGAGATCAC GGCCCTTCAC CCCGGAATGA TCGACTCACC GCCCGGGCTG
GTCGTCCACG GCGAGTTTGG TTCGGGAAAG AGCCACATCG TCTGGTGGGC GCGCAAGTTC
ATCGCCGGTA TCGGTGGCTA CTATTTCAAC ATCCAACCCG ACGGCGCTCC CGAAACCTTG
TGGACACGGG TGCTTGCCTC GATGGTCCGG GACCTGTGTG AGCCCATGGA CCCGCACCAG
CTGCCGCCCA CCGTGACCAC CCAACTGGCG TTGGCGGTGG AACGGCTGGC CAAGGACGTG
GGTCTCGACG AACCGGCGCG GGCGGTCGTC AGCGGCCGAA AGCGCGTCGA CACCGAACAG
TCGCGCTCGT ACCTGCGCGC CTTCACCGAC GGGGTGCGTT CCCGCCACCC GAGCCGGGGA
CTGCGAAACG TCGCCCTGGC CCTCGCGCTG CTGGCGATCG ACGATGACGA CGCCAACGCC
GCCGGCTGGG CCTACCTGCA CGACAGCGAC GACGAAATGG ACTCGCGGCA CAACTGGGAC
CTGCGGCCGG TCCGGCCCGC CTCACCCGAC GAGGTGGTGC GGCACCTGTC GCAGCTGCTG
GCCAAGACCG GGCCGTCCCT GTTCGTCGTG GACCAGATCG ACGAACTGGT GGTCCGCTCC
GCGCAGTCTA CGGAGTCGGC GGCATCGGAC GGGGAGTCTG CCGATCTGGC CGCCGCGTTG
ATGACGATCC GCGAGAAACT GACCCGAAGC ATCACGCTCA TCTCCTGCCT GGAGCACACC
TGGGAGACGA TTCGCTCCCG CGCGGCCCGG TCGGCCCTGG ACCGGTTCCA CGGCGCTTTG
CGGCTGAATC CGATCCCCAA CGGGGACACC GCCCGCCGCC TCGCGGCGGT CTTCCTGGCG
CCGCAGTTTC AGCGACTGGG ATTCGCGCCG CCGTATGACA CCTGGCCGAT TCCCCCGGCC
GCGTTCGACG AAGCGGCCCA GCATCGACCC CGGCAACTGA TCCAACTCGT CGGTGAACAC
GTCCGCGAGT GTGTGGCTGC CGGTGAACTG GTGCCGGTGA CGGTCTTTCA GAATCGCCGC
CGACCCCCGG ACGGTACCGG GACGGCTGAC AAACCGGAGG ATCCCGAGGC GTCGGAAACG
CAGACACGGT ATCTCTCCCA CCGGCGAACA CTGCATGTGG ACGGTCTCAA GGAGACCTCC
GCCGAACGCG ATCTCGCCGA CGTGCTGACC GGCGCCGCAC GGGCCCTGGC CACGGAGGCC
GGTCTCGGTG AGAGCACCCA GGTTCGCGAC GCGTGTCGCG GCGCCGAGAA GGCCTCCATC
CACTGCGAGA TCACCACCGC GGCGAAAGCC AAGATCCTCA TACGCGGCAT CAACACCATC
AGCGCCGCGC ACGTCGGTCA ACGCGTCGAC AACGCCAGGG CGGTCGCTGC GGCCGAGACC
GCGGACTCCG TTCACCTGTT CATCGTGCGA ACGAACCCCT GGAAACCGAC CACCCGCATC
AAGTCCGTGA CCAACGAACT GGCGGCTTCG AACGGGGTCG TCACCGAGAT CAGCGACGAC
GACCTGCGAA CCCTGCGCGC CGTCCAGCTC ACCACCACCA GCGACACCGA CGAAGTGCGC
CAATGGCTGC GCGACACCCG ACCCGTGAGC GGAACCGAGC TGGGCAGGGC ACTGCTCAAA
CTCGTCAAAC CCGAATCCGG CACCCCACTG GATTCCTCGC CTAAGACACC AGACGCGACC
CCACCGGCGA CACCGAAGCT GACCGACGCG CCGCCCATGG TCGCCGAAAC CGTGATCCCA
CTGGGTCTCA ACCCCCGAGG CGAACCGGTC ACCATCGAGC TACCGGCGCT GCGCAAACAC
GTCGCCATGT TCGCCGCCTC CGGATCAGGC AAGACCGTCC TGTTGCGACG CATCATCGAG
GAGTGCGCTC TTCGTGGCGT CAGTACCATC GTCCTGGACC CTAACAACGA CCTGGCCCGT
CTCGGCGACG CCTGGCCGTC CAACCCGGAC GGCTGGTGGC CCGGCGACGA AGAACGCAGT
CTGGACTATC TCAAGAACAC CGACGTCGTG GTGTGGACTC CAGGAGTCAG CCGCGGCAAC
CCCTTGACCC TGCAACCCTT CCCTGACTTC ACCGCCGTGC GCGACGACCC GGACGACCTA
CGGCTGGCCA TCGAGACCGC CGTCGCGTCG CTGGCTCCCC GCGCTCGGAT CGACGCCGAG
AACCACCAGG CGGACGGCCG TCGCGCAGTG CTGCGGGTGA CGCTGCGGGA GTTCGCGCGT
CGCGGCGGCG GTGACCTGGG GCAGCTCATC GAACTGCTTC GCGAACCGTC CGATGAGGTG
CTGGCCGCGC TGCCGTCAGC CGACCGGCAC GCCACCTACG TGGCCTCGGC GTTGGCGTAC
GCGCGCTCCA ACGATCCGCT GTTCGACGGC GAAGGCGTCC ACTTCGACCC CGATCGGCTG
CTGGCTCCCG CGAACGGTTA CCGGGCCCGG GTCTCGGTGA TCAACCTCGC CGGAATCCCT
GACGAGAACC GTCCCGCGTT CGTCAACCGG CTCCAGATGG CGCTGTTCAC CTGGATCAAG
CGCCACCCGG CTCGCGACAA ACCACTCAGT GGACTGTTCA TCATGGATGA GGCGCAGACG
TTCATCCCGT CCGGACGAAA CACCCCGTGC ACCGAGAGCA CCCGCAATCT CGCCTCACAG
GCCCGCAAAT ACGGGCTCGG CCTCGTCTAC GCCACCCAGG CACCGCGCGG GATCGACAGT
CGTATCACCG GCAACGCCGC CACCCACGTC TACGGCCGCG TGGTGGTTCC CCCGCACGTC
GGCGCCGTCA ACGACATGGC CAGGGCCCGA GGCGACGAAC CGCCGCCGAT CTCCCAGCTG
ACCGCCGGGC GGTTCTATGT CTCACTGGAG GGCCACCCGC TCACCCAAAC GACGGTCCCC
ATGTGCCTGA GCCACCACGG GCCACCACTG GAGGAAGGCG AGATCTCCGA ACGAGCTCGA
TCGAAGCGGC GACAACCATG A
 
Protein sequence
MDARERTILE SLRFDAAPTE KTLWGGRLPH LPDLNQQVYD RLRHEITALH PGMIDSPPGL 
VVHGEFGSGK SHIVWWARKF IAGIGGYYFN IQPDGAPETL WTRVLASMVR DLCEPMDPHQ
LPPTVTTQLA LAVERLAKDV GLDEPARAVV SGRKRVDTEQ SRSYLRAFTD GVRSRHPSRG
LRNVALALAL LAIDDDDANA AGWAYLHDSD DEMDSRHNWD LRPVRPASPD EVVRHLSQLL
AKTGPSLFVV DQIDELVVRS AQSTESAASD GESADLAAAL MTIREKLTRS ITLISCLEHT
WETIRSRAAR SALDRFHGAL RLNPIPNGDT ARRLAAVFLA PQFQRLGFAP PYDTWPIPPA
AFDEAAQHRP RQLIQLVGEH VRECVAAGEL VPVTVFQNRR RPPDGTGTAD KPEDPEASET
QTRYLSHRRT LHVDGLKETS AERDLADVLT GAARALATEA GLGESTQVRD ACRGAEKASI
HCEITTAAKA KILIRGINTI SAAHVGQRVD NARAVAAAET ADSVHLFIVR TNPWKPTTRI
KSVTNELAAS NGVVTEISDD DLRTLRAVQL TTTSDTDEVR QWLRDTRPVS GTELGRALLK
LVKPESGTPL DSSPKTPDAT PPATPKLTDA PPMVAETVIP LGLNPRGEPV TIELPALRKH
VAMFAASGSG KTVLLRRIIE ECALRGVSTI VLDPNNDLAR LGDAWPSNPD GWWPGDEERS
LDYLKNTDVV VWTPGVSRGN PLTLQPFPDF TAVRDDPDDL RLAIETAVAS LAPRARIDAE
NHQADGRRAV LRVTLREFAR RGGGDLGQLI ELLREPSDEV LAALPSADRH ATYVASALAY
ARSNDPLFDG EGVHFDPDRL LAPANGYRAR VSVINLAGIP DENRPAFVNR LQMALFTWIK
RHPARDKPLS GLFIMDEAQT FIPSGRNTPC TESTRNLASQ ARKYGLGLVY ATQAPRGIDS
RITGNAATHV YGRVVVPPHV GAVNDMARAR GDEPPPISQL TAGRFYVSLE GHPLTQTTVP
MCLSHHGPPL EEGEISERAR SKRRQP