Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3967 |
Symbol | |
ID | 8885168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4230761 |
End bp | 4233901 |
Gene Length | 3141 bp |
Protein Length | 1046 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | AAA ATPase |
Protein accession | YP_003512712 |
Protein GI | 291301434 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCAC GGGAACGAAC GATATTGGAG TCACTGCGCT TCGACGCGGC TCCGACCGAG AAGACACTGT GGGGCGGGCG GTTGCCGCAT CTGCCGGACC TGAACCAGCA GGTCTACGAC CGGCTCCGGC ACGAGATCAC GGCCCTTCAC CCCGGAATGA TCGACTCACC GCCCGGGCTG GTCGTCCACG GCGAGTTTGG TTCGGGAAAG AGCCACATCG TCTGGTGGGC GCGCAAGTTC ATCGCCGGTA TCGGTGGCTA CTATTTCAAC ATCCAACCCG ACGGCGCTCC CGAAACCTTG TGGACACGGG TGCTTGCCTC GATGGTCCGG GACCTGTGTG AGCCCATGGA CCCGCACCAG CTGCCGCCCA CCGTGACCAC CCAACTGGCG TTGGCGGTGG AACGGCTGGC CAAGGACGTG GGTCTCGACG AACCGGCGCG GGCGGTCGTC AGCGGCCGAA AGCGCGTCGA CACCGAACAG TCGCGCTCGT ACCTGCGCGC CTTCACCGAC GGGGTGCGTT CCCGCCACCC GAGCCGGGGA CTGCGAAACG TCGCCCTGGC CCTCGCGCTG CTGGCGATCG ACGATGACGA CGCCAACGCC GCCGGCTGGG CCTACCTGCA CGACAGCGAC GACGAAATGG ACTCGCGGCA CAACTGGGAC CTGCGGCCGG TCCGGCCCGC CTCACCCGAC GAGGTGGTGC GGCACCTGTC GCAGCTGCTG GCCAAGACCG GGCCGTCCCT GTTCGTCGTG GACCAGATCG ACGAACTGGT GGTCCGCTCC GCGCAGTCTA CGGAGTCGGC GGCATCGGAC GGGGAGTCTG CCGATCTGGC CGCCGCGTTG ATGACGATCC GCGAGAAACT GACCCGAAGC ATCACGCTCA TCTCCTGCCT GGAGCACACC TGGGAGACGA TTCGCTCCCG CGCGGCCCGG TCGGCCCTGG ACCGGTTCCA CGGCGCTTTG CGGCTGAATC CGATCCCCAA CGGGGACACC GCCCGCCGCC TCGCGGCGGT CTTCCTGGCG CCGCAGTTTC AGCGACTGGG ATTCGCGCCG CCGTATGACA CCTGGCCGAT TCCCCCGGCC GCGTTCGACG AAGCGGCCCA GCATCGACCC CGGCAACTGA TCCAACTCGT CGGTGAACAC GTCCGCGAGT GTGTGGCTGC CGGTGAACTG GTGCCGGTGA CGGTCTTTCA GAATCGCCGC CGACCCCCGG ACGGTACCGG GACGGCTGAC AAACCGGAGG ATCCCGAGGC GTCGGAAACG CAGACACGGT ATCTCTCCCA CCGGCGAACA CTGCATGTGG ACGGTCTCAA GGAGACCTCC GCCGAACGCG ATCTCGCCGA CGTGCTGACC GGCGCCGCAC GGGCCCTGGC CACGGAGGCC GGTCTCGGTG AGAGCACCCA GGTTCGCGAC GCGTGTCGCG GCGCCGAGAA GGCCTCCATC CACTGCGAGA TCACCACCGC GGCGAAAGCC AAGATCCTCA TACGCGGCAT CAACACCATC AGCGCCGCGC ACGTCGGTCA ACGCGTCGAC AACGCCAGGG CGGTCGCTGC GGCCGAGACC GCGGACTCCG TTCACCTGTT CATCGTGCGA ACGAACCCCT GGAAACCGAC CACCCGCATC AAGTCCGTGA CCAACGAACT GGCGGCTTCG AACGGGGTCG TCACCGAGAT CAGCGACGAC GACCTGCGAA CCCTGCGCGC CGTCCAGCTC ACCACCACCA GCGACACCGA CGAAGTGCGC CAATGGCTGC GCGACACCCG ACCCGTGAGC GGAACCGAGC TGGGCAGGGC ACTGCTCAAA CTCGTCAAAC CCGAATCCGG CACCCCACTG GATTCCTCGC CTAAGACACC AGACGCGACC CCACCGGCGA CACCGAAGCT GACCGACGCG CCGCCCATGG TCGCCGAAAC CGTGATCCCA CTGGGTCTCA ACCCCCGAGG CGAACCGGTC ACCATCGAGC TACCGGCGCT GCGCAAACAC GTCGCCATGT TCGCCGCCTC CGGATCAGGC AAGACCGTCC TGTTGCGACG CATCATCGAG GAGTGCGCTC TTCGTGGCGT CAGTACCATC GTCCTGGACC CTAACAACGA CCTGGCCCGT CTCGGCGACG CCTGGCCGTC CAACCCGGAC GGCTGGTGGC CCGGCGACGA AGAACGCAGT CTGGACTATC TCAAGAACAC CGACGTCGTG GTGTGGACTC CAGGAGTCAG CCGCGGCAAC CCCTTGACCC TGCAACCCTT CCCTGACTTC ACCGCCGTGC GCGACGACCC GGACGACCTA CGGCTGGCCA TCGAGACCGC CGTCGCGTCG CTGGCTCCCC GCGCTCGGAT CGACGCCGAG AACCACCAGG CGGACGGCCG TCGCGCAGTG CTGCGGGTGA CGCTGCGGGA GTTCGCGCGT CGCGGCGGCG GTGACCTGGG GCAGCTCATC GAACTGCTTC GCGAACCGTC CGATGAGGTG CTGGCCGCGC TGCCGTCAGC CGACCGGCAC GCCACCTACG TGGCCTCGGC GTTGGCGTAC GCGCGCTCCA ACGATCCGCT GTTCGACGGC GAAGGCGTCC ACTTCGACCC CGATCGGCTG CTGGCTCCCG CGAACGGTTA CCGGGCCCGG GTCTCGGTGA TCAACCTCGC CGGAATCCCT GACGAGAACC GTCCCGCGTT CGTCAACCGG CTCCAGATGG CGCTGTTCAC CTGGATCAAG CGCCACCCGG CTCGCGACAA ACCACTCAGT GGACTGTTCA TCATGGATGA GGCGCAGACG TTCATCCCGT CCGGACGAAA CACCCCGTGC ACCGAGAGCA CCCGCAATCT CGCCTCACAG GCCCGCAAAT ACGGGCTCGG CCTCGTCTAC GCCACCCAGG CACCGCGCGG GATCGACAGT CGTATCACCG GCAACGCCGC CACCCACGTC TACGGCCGCG TGGTGGTTCC CCCGCACGTC GGCGCCGTCA ACGACATGGC CAGGGCCCGA GGCGACGAAC CGCCGCCGAT CTCCCAGCTG ACCGCCGGGC GGTTCTATGT CTCACTGGAG GGCCACCCGC TCACCCAAAC GACGGTCCCC ATGTGCCTGA GCCACCACGG GCCACCACTG GAGGAAGGCG AGATCTCCGA ACGAGCTCGA TCGAAGCGGC GACAACCATG A
|
Protein sequence | MDARERTILE SLRFDAAPTE KTLWGGRLPH LPDLNQQVYD RLRHEITALH PGMIDSPPGL VVHGEFGSGK SHIVWWARKF IAGIGGYYFN IQPDGAPETL WTRVLASMVR DLCEPMDPHQ LPPTVTTQLA LAVERLAKDV GLDEPARAVV SGRKRVDTEQ SRSYLRAFTD GVRSRHPSRG LRNVALALAL LAIDDDDANA AGWAYLHDSD DEMDSRHNWD LRPVRPASPD EVVRHLSQLL AKTGPSLFVV DQIDELVVRS AQSTESAASD GESADLAAAL MTIREKLTRS ITLISCLEHT WETIRSRAAR SALDRFHGAL RLNPIPNGDT ARRLAAVFLA PQFQRLGFAP PYDTWPIPPA AFDEAAQHRP RQLIQLVGEH VRECVAAGEL VPVTVFQNRR RPPDGTGTAD KPEDPEASET QTRYLSHRRT LHVDGLKETS AERDLADVLT GAARALATEA GLGESTQVRD ACRGAEKASI HCEITTAAKA KILIRGINTI SAAHVGQRVD NARAVAAAET ADSVHLFIVR TNPWKPTTRI KSVTNELAAS NGVVTEISDD DLRTLRAVQL TTTSDTDEVR QWLRDTRPVS GTELGRALLK LVKPESGTPL DSSPKTPDAT PPATPKLTDA PPMVAETVIP LGLNPRGEPV TIELPALRKH VAMFAASGSG KTVLLRRIIE ECALRGVSTI VLDPNNDLAR LGDAWPSNPD GWWPGDEERS LDYLKNTDVV VWTPGVSRGN PLTLQPFPDF TAVRDDPDDL RLAIETAVAS LAPRARIDAE NHQADGRRAV LRVTLREFAR RGGGDLGQLI ELLREPSDEV LAALPSADRH ATYVASALAY ARSNDPLFDG EGVHFDPDRL LAPANGYRAR VSVINLAGIP DENRPAFVNR LQMALFTWIK RHPARDKPLS GLFIMDEAQT FIPSGRNTPC TESTRNLASQ ARKYGLGLVY ATQAPRGIDS RITGNAATHV YGRVVVPPHV GAVNDMARAR GDEPPPISQL TAGRFYVSLE GHPLTQTTVP MCLSHHGPPL EEGEISERAR SKRRQP
|
| |