Gene Snas_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3958 
Symbol 
ID8885159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4223718 
End bp4224296 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content64% 
IMG OID 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_003512703 
Protein GI291301425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.82049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA GGAAGTGGAC GATCGCCGCC GTGGCAGCCG CGACCATCGC GGTCGCCGGT 
GGCACCGCGG GATGGGCCGC GGCCGACAGC GTCGACACCA AGGCGTCGAC CTATGTGGAT
GGTCTCAACA AGGTGACCGA CGACTGGAAC GACCACTACC GGGAACTGGG TGGTTCACTG
TGCGACGGGT GCGAGAACTC CGACAACACC GACCTGGTCG TGCTGTGGCA GTCGGTTCTG
GTCGTCGACG GGTTCCTGGC CACTGAGGAC CCCATCGACG GGTACTTCGG GCCCGACACC
AAGCGCGCCA CCGCCATGTG GCAGGACCAC TTCGGTGTGA AGCAGACCGG CAAGGTGAAC
GCCGCCACCT GGGCCGAGGC CAGCAGTCAC CTGAGTGAGA CCGACGGCAC CGTCTACTAC
GCCAAGGAGG GTGGCGGCGA GGTTCGTTTC ACCCGACACG AGGACGGTTC CTACACCTTT
AACAAGGTGC TGATCCCGGG TGGCGAGGAA CTGGTCAACA ACGGCGGCAA GCGGATCGAG
TTCTACAAGC GGACCGTCAA GCTAGCTCCG GTCGGATAA
 
Protein sequence
MASRKWTIAA VAAATIAVAG GTAGWAAADS VDTKASTYVD GLNKVTDDWN DHYRELGGSL 
CDGCENSDNT DLVVLWQSVL VVDGFLATED PIDGYFGPDT KRATAMWQDH FGVKQTGKVN
AATWAEASSH LSETDGTVYY AKEGGGEVRF TRHEDGSYTF NKVLIPGGEE LVNNGGKRIE
FYKRTVKLAP VG