Gene Snas_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3922 
Symbol 
ID8885122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4188017 
End bp4189396 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512670 
Protein GI291301392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0110065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGG GAGCCATGGG CCACCTGTCC GACCGGGTGC GTTCGGCCAG CTACGAGCAC 
CCGAGGTCGA CACCGTTCGC GCCGAGGACC GAGACCGACT GGAACCCCAC GCCCGCGTTG
CGGCGCGCCC TCATCGTCGT CATCGTCGCC CTGGGGCTGG GACTGATCCT GGGGCGCGTG
GACCTGCTGC TGGTGTCGAT GCCGCTGGCG TTGGGCCTGG CCGCGTCGCT GACTCGGCGC
CCGCGCCGCA GTCCGGAACT GCGGCTTTTG GGGATGCCCG AGACCCCGCT GTTGGAGGGC
GGTGAGCTGC GGGCCGAGAT CGAAGTGTCC AATCCGGACG AGGTGGAGAT CGTCGCGGTC
GCCCGGCCCC GGGTGTCGCA GTGGATCCGG TTGAGCCACG GCGGTTTCCG GCAGGCGGCG
GTGGTGCCCG CCGACGGACA CGCGTCGCTG CCGCTGACGG CTGTGACGCG GCGCTGGGGA
CTGCACCGGT TCGGCCCCAT CGAGGTGCGG GCGCTGGCCT GCGACGGTCT GCTGCGGTCG
CGGCAGTTGA GCGTCGCCAA GCAGACCCTC ACGGTGTATC CCCGCGCGGC GTTGTTCGAC
TCGCGGCAGT CGCTGCCGCG CGCGGCGGGC CTGGCGGGCG TGCACCACAC CCGCCGTCCC
GGCGACGGCG GCGAACTGGC GGAGGTGCGC AGGTTCCAGC CCGGGGACCG GCTGCGCAGC
ATCGACTGGC GGGTGAGCCT GCGGCAACGG GAACTGCACG TCAACGCGAC CTATTCGGAG
CGCGACGCGG ATGTGCTGAT CCTGCTGGAC GTCCTCAGCG AGGTGGGGCA GCCCGGGCAG
GCCAGTTCGC TGGACGTGAC GGTGCGGGCG GCGGCGGCCA TCGCCGAGCA CTACACCTCG
CAGGGCGACC GGGTGGCGAT GGCCGAGTTC GGTTCCAAGA ACCGTCGACT GCGCGCCGGT
GGCGGACGTC GCCACTACGC GCTGGTCCAG GACTGGCTGA CCCATGTGGA CCCGTCGCGC
GGCGAGATCC GCGCCGCCGC CGAACGGCAG CTGGTGTCGC GCAAGCTGCC CGGCAGCGCG
GCGATCATCA TGCTCACGCC GCTGCTGGAC CCGCGCAGCA CCTCGGGGCT GGCGCGGTTG
GCGCAGACGG GGCGGCCGCT GGTCGCGGTG GACACACTGC CGCCGGGGGT GCGGCCGACC
CAGCAGCGGG AATGGACCCA GTTGGCGTTT CGGCTGTGGC ACCTGGAGCG CGACAACACG
CTCAACCGGT TGCGGGCCTT GGGGGTTCCG GTGGAGCGTT GGATGGGGCC GGGGAGTCTG
GACCACATGT TGCGGCAGGT CGCGCTTTTG GACCACGTTC CGAAGTTGGC GCGGCGGTGA
 
Protein sequence
MSLGAMGHLS DRVRSASYEH PRSTPFAPRT ETDWNPTPAL RRALIVVIVA LGLGLILGRV 
DLLLVSMPLA LGLAASLTRR PRRSPELRLL GMPETPLLEG GELRAEIEVS NPDEVEIVAV
ARPRVSQWIR LSHGGFRQAA VVPADGHASL PLTAVTRRWG LHRFGPIEVR ALACDGLLRS
RQLSVAKQTL TVYPRAALFD SRQSLPRAAG LAGVHHTRRP GDGGELAEVR RFQPGDRLRS
IDWRVSLRQR ELHVNATYSE RDADVLILLD VLSEVGQPGQ ASSLDVTVRA AAAIAEHYTS
QGDRVAMAEF GSKNRRLRAG GGRRHYALVQ DWLTHVDPSR GEIRAAAERQ LVSRKLPGSA
AIIMLTPLLD PRSTSGLARL AQTGRPLVAV DTLPPGVRPT QQREWTQLAF RLWHLERDNT
LNRLRALGVP VERWMGPGSL DHMLRQVALL DHVPKLARR