Gene Snas_3919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3919 
Symbol 
ID8885119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4185849 
End bp4186244 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content66% 
IMG OID 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003512667 
Protein GI291301389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.972554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCCA GCCCCGACAC CGGCCCCAGC GACGAACTCG TCGCCGACGT CTTCGACCGC 
AAATGTCCCT CGCGCGGCGT CATGGAGCAT GTCGGCAGCA AGTGGGGCAT CCTCAGCCTC
ACCGCCCTCG ACCAACGACC GATGCGCTTC AACGCCTTGC GGCGCACCGT GACCGGCGTC
AGCGAGAAGA TGCTCTCCCA GACGCTGCAC ACCCTGGAAC GCGACGGGTT CGTCCACCGC
GAGGTGCACA CCAGCATCCC CCCGCACGTC GAGTACAGCG TCACACCGCT GGGGCACCGG
GTGGCCGTCA AACTCGCCGA ACTCATCGAC CTGCTCGAGG ACACTCTGGA CGAATCGGTC
GCGGCCCAGG AGGCCTACGA CAAACGTGTC GCATGA
 
Protein sequence
MSASPDTGPS DELVADVFDR KCPSRGVMEH VGSKWGILSL TALDQRPMRF NALRRTVTGV 
SEKMLSQTLH TLERDGFVHR EVHTSIPPHV EYSVTPLGHR VAVKLAELID LLEDTLDESV
AAQEAYDKRV A