Gene Snas_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3905 
Symbol 
ID8885105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4173260 
End bp4174438 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content71% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003512653 
Protein GI291301375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0803065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCG CACTGCTGGC GCTGGTCATC AGCGCCTTCG GCATCGGCAC CACGGAATTC 
GTGACCATGG GCCTGGTGCC GCAGCTGACC GCCGAGTTCG ACGTCTCGGT GCCGACCGTG
GGACTGCTGG TGTCGGCCTA CGCGTTCGGC GTCACCGTCG GCGCCCCGAT CCTGACGCTG
CTGGGCGCCC GGGTTCCCCG CAAGACCATG CTGCTGAGCC TGATGGGCTT CTACCTCGCC
GGGAACCTCA TCTCCGCGCT GGCCCCCAGT TACGGCGTCC TCATGACCGG ACGCATCGTC
GCCTCCTTCA CGCACGGGGC GTTCTTCGGT ATCGGCGCGG TGGTCGCCGC CAGTCTCGTC
GCGCCCGAGA AGCGGGCCCG GGCCATCGCG TTGATGTTCA CCGGCGTCAC CCTCGCCAAC
GTGCTGGGCG CGCCCGGCGG CACCGTCGTC GGACAGCTCA TGGGCTGGCG GGCCGCGTTC
TGGGCCATCA TCCTCATCGG AGCGATCGCG TTCGTGGCGC TGTGGGCCCT GGTTCCGGCC
CAGCCCCGGC CCGCCGACGC CGGTATCGCC CGGGAGCTGG CGGTGTTCAG GCGGCCGCAG
GTGTGGCTGG CGCTGGGCAT GACCGTGATC GGCTACGCCC CGGTCTTCGC CGTGTACACC
TACATCGAGC CCATCCTGCG CGAGTCGGCC GGATTCGGCG CGGCCGCCGT GCCGATCATC
ATGGCGCTGT TCGGCGTCGG CCTGGTGCTG GGCAACCTGT ACGGGGGACG GATGGCCGAC
CGGCGGCTGA TGCCGACGGT GTACCTGACG CTGGCGGGCA TCACGGTCGT GGCCGGGGCG
TTCTGGTTCA CCGCCGGGTC GCAGATCGCG ATCACCGTGA CGGTGTTCGT GTTCGGGTTC
ATCGGTTTCG CCTCGGTGCC GCCGTTGCAG ATGCGGGTCC TCAACGAGGC CGAGGGCGCC
CCGGCACTGG CCTCGGCCGC CAACATCGGC GCGTTCAACC TCGGCAACGC CCTGGGGCCG
TTCCTGTCCG GCATCACGAT CGAGGCCGGG CTGGGACTGG GCTCGGCGGC CTGGGTGGGC
GTGGCACTCG GTGTGGTCGG GCTTTCCATC GCCGTCGTGT CCGGCACCAT GGACCGGCGC
GCGGCCCGCG TGCCGCGTCC CGAGCCGGTG CCCGCCTGA
 
Protein sequence
MPIALLALVI SAFGIGTTEF VTMGLVPQLT AEFDVSVPTV GLLVSAYAFG VTVGAPILTL 
LGARVPRKTM LLSLMGFYLA GNLISALAPS YGVLMTGRIV ASFTHGAFFG IGAVVAASLV
APEKRARAIA LMFTGVTLAN VLGAPGGTVV GQLMGWRAAF WAIILIGAIA FVALWALVPA
QPRPADAGIA RELAVFRRPQ VWLALGMTVI GYAPVFAVYT YIEPILRESA GFGAAAVPII
MALFGVGLVL GNLYGGRMAD RRLMPTVYLT LAGITVVAGA FWFTAGSQIA ITVTVFVFGF
IGFASVPPLQ MRVLNEAEGA PALASAANIG AFNLGNALGP FLSGITIEAG LGLGSAAWVG
VALGVVGLSI AVVSGTMDRR AARVPRPEPV PA