Gene Snas_3900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3900 
Symbol 
ID8885100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4167301 
End bp4168332 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content68% 
IMG OID 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_003512648 
Protein GI291301370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.93635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCA TCGCGACCAA CCAGCTGACC GTGCCGGACG AGATCCGCTC CCGCCCCGGC 
ACCGCCCGAA TGCTCACCGG AGACCGCCCC ACCGGCAAAC TCCACATCGG ACATTACTTC
GGCAGCCTGC GCAACCGGGT CCGCCTACAG AACCAGGGCG TGGACTCACT CGTCGTCATC
GCCGACTACC AGGTCCTCAC CGACCGCGAC ATCGCCGCCG ACCTGTCCGG ACACATCCAC
GAGATCGTGC TGGACTACCT GGCAGCGGGC ATCAGCCCAC AACGCTCCAC GATCTTCACC
CACAGCGCGG TACCGGCGCT GAACCAACTG CTGCTGCCGT TCCTGAGCCT GGTGTCGACG
GCCGAACTGG ACCGCAACCC CACCGTCAAG GAGGAGATCG CCGCCGCCCG CCGCGCGAGC
GTCAGCGGCC TCATCTACAC CTACCCGGCC CACCAGGCCG CCGACATCCT GTTCTGCGAC
GCCACCGTCG TACCCGTCGG GGACGACCAA CTCCCACACC TGGAACTGAC CCGCACCATC
GCGCGGCGCT TCAACGACCG CTACGGCAAG GTCTTCACGG TCCCCAAACC CCTGCTGTCC
CCGGCACCAC GACTGCTGGG TGTGGACGGC CGCACCAAGA TGAGCAAGAG CCGGGGCAAC
GCGATCGCAC TGAGCGCCAC CGCCGACGAA ACGGCCCGGC TCATCAAGAG CGCGGTCACC
GACGCCGACC GCCACATCAA CTACGACCCG GCCAACCGCC CCGGAGTATC AAACCTGCTG
CTCCTCATCG GACTGTGCAC CGGCCAGGAA CCCGAACAGG TCGCCGAAAG CCTGTCGGGA
GCCGCCGACC TGAAACGCAC CTGCACCGAG GCGGTCAACG AGTTCTTCGC CCCGCTGCGA
CGACGACGGC GCGAACTGGC GGCCGACCCC GCCCAGGTCG GCCGAATCAT CACCGAGGGC
AACACCCGAG CCCGCACCAT CGCCGACGAC ACCCTCGACC GGGTACGCCG AGCAATGGGC
ACCTTCGCCT GA
 
Protein sequence
MTTIATNQLT VPDEIRSRPG TARMLTGDRP TGKLHIGHYF GSLRNRVRLQ NQGVDSLVVI 
ADYQVLTDRD IAADLSGHIH EIVLDYLAAG ISPQRSTIFT HSAVPALNQL LLPFLSLVST
AELDRNPTVK EEIAAARRAS VSGLIYTYPA HQAADILFCD ATVVPVGDDQ LPHLELTRTI
ARRFNDRYGK VFTVPKPLLS PAPRLLGVDG RTKMSKSRGN AIALSATADE TARLIKSAVT
DADRHINYDP ANRPGVSNLL LLIGLCTGQE PEQVAESLSG AADLKRTCTE AVNEFFAPLR
RRRRELAADP AQVGRIITEG NTRARTIADD TLDRVRRAMG TFA