| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3898 |
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| Symbol | |
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| ID | 8885098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4164708 |
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| End bp | 4165850 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_003512646 |
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| Protein GI | 291301368 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.159455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCCGC TTTCGGGGAT CCGGGTCATC GAGCTGGCGA GTCTGGCCCC GGCACCGTTC
ACCGCCACCG TCCTGTCCGA CCTGGGCGCC GAGGTGCTGC GGCTCGACCG CGCCGAGACC
GTGCCGTCCA CGACCGGGAG CCCGCCGCCC GAACCCTTGG GGCGGGGGCG CCGGTCGGTG
GCGGTGGACC TGAAGCGGCC CGGCGGCGCC AGCCTGGTCC TGGACCTGGT CGGCCGCACC
GATGTCCTGC TGGAGGGTTT TCGGCCGGGC GTGTGCGAAC GGCTGGGCAT CGGCCCCGAC
GCGTGCCTGG CCCGCAACCC CCGGCTCGTC TACGGACGGC TCACCGGCTG GGGCCAGACC
GGGCCGCTGG CGCAGCGCGC CGGTCACGAC ATCAACTACC TGGCGCTGTC GGGCGCGCTG
TACCCGATCG GGCCCGCCGA CGGCCCGCCC ACCCCGCCCA TCAACTACGT CGCCGACTTC
GGCGGCGGCG GGATGCTGTT GGCCGTCGGC GTGCTGGCGG CCCTGTTCGA ACGGGAACGC
TCCGGGGCCG GGCAGGTCAT CGACGCGGCC ATGACCGAGG GCGCCGGGCT GCTGTCGTCG
CTGCTGCACG GCCTCAAGGC GCGCGGCATG TGGAGCGACG AACGCGGCGG CAACCCGTTG
GACGGCACCG CGCCGTTCTA CGGCACCTAC GCGTGCGCGG ACGGTGGGTT CGTGGCCGTG
GGCGCCCTGG AACCGCAGTT CTACGCCGAA CTGGTCAAGG GGCTCGAGCT GATCGACCCG
CCGACCCAGT ACGACCAGTC CGGCTGGCCC GAAGCCCGCC GCCGGTTCGC CGACGCCTTC
GCCAGCCGCA CCCGCGACGA GTGGGCGGCG GTCTTCGAGG GCACCGACGC CTGTGTCACG
CCGGTGCTGA CACTCGACGA GGCGCCCGAC CATCCGCACA ACCGGGCCCG CGCGTCGTTC
ACCGAGGTCG CCGGACTGCG GCAGCCCGCG CCTGCGCCCC GGCTGTCGCG CACCCCCGGC
GCGGTCGCCG GACCCGCCCC GCAGCCCGGC GAACACACCC GCGCCGCCCT GACCGACTGG
GGCATCTCGG CCGAGGACCT GGCCGGACTG TTCGCCACCG GGGTGCTGTC TGAACTGGAG
TGA
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| Protein sequence | MGPLSGIRVI ELASLAPAPF TATVLSDLGA EVLRLDRAET VPSTTGSPPP EPLGRGRRSV
AVDLKRPGGA SLVLDLVGRT DVLLEGFRPG VCERLGIGPD ACLARNPRLV YGRLTGWGQT
GPLAQRAGHD INYLALSGAL YPIGPADGPP TPPINYVADF GGGGMLLAVG VLAALFERER
SGAGQVIDAA MTEGAGLLSS LLHGLKARGM WSDERGGNPL DGTAPFYGTY ACADGGFVAV
GALEPQFYAE LVKGLELIDP PTQYDQSGWP EARRRFADAF ASRTRDEWAA VFEGTDACVT
PVLTLDEAPD HPHNRARASF TEVAGLRQPA PAPRLSRTPG AVAGPAPQPG EHTRAALTDW
GISAEDLAGL FATGVLSELE
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