Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3889 |
Symbol | |
ID | 8885089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4155759 |
End bp | 4156658 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003512637 |
Protein GI | 291301359 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.110513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.292317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAG CCACCCCGCG CGCCGACGCC CGCCGCAACC GTGCCAACGT GCTGGCCGCC GCCGAGGACC TGTTCGCCAG CCAGGGCCTT TCGGTCCCGC TCGACGAGAT CGCCCGGGCC GCCGGGGTCG GCGCCGGTAC CGTCTACCGC CACTTCCCCA CCAAGGACGC CCTGTTCGAG GCGGTCATGG CCCAGCGGAT CGAGCAGCTG GGAGCCAGCG CCGTGTCAGC CCTGGAGTGC GAGGACGCCG AGTCGGCCTT CTACGAGTTC CTCGCCCACG CCATGGAACA GGCCCGGCTC AACCGGGCAC TGTGCGACGC CATGGCCCGC CACGACGAGT GGCGGGCGGC GGCCGAGACC ACCGGCCCGC ACTGCCGGTT CACCGACGCC TTCGAGCGGC TGCTGCGCCG GGCCCAGACG GCCGGAGCGG TACGCACCGA TGTGGACGTC GACGACCTCG CGGCCCTGAT CCCGGGGTAC GTGGCCATGG TCGCCCACCG CGAGGACGAG GCGGGCGCGC GACGCATCAG GATGCTGCTG TGGGACGGGC TGCGGCCGCC CGGAACGAAA CGAAACCCGG CGCCTTTCCG TAACGAAACT CCGGTGTCGA TCCCCGACCG TAACGAAACT CGGCCGCGTT GCGAGACCTG CGACAGCCCG ATCCACACCG CGAACACCGG ACGTCCGGCG AGGTATTGCA GTCCGGCCTG TCGCCAGAAG GCGCACCGGC GGCGCGCGAC GGCCCGCACC CGGCAACCGG TTTCGTTACG GACCCGAAGT CTCCATGTAG GACAGTCTGA GTTCGCCTTC GCCTTCCGGT TCACGGTCGC CGACGGTCGC ATCACCCACT ACATCCCGCA CGAGGACTCA CTCGCCCTGT CGCGCGCCTA CGCGGATTGA
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Protein sequence | MTAATPRADA RRNRANVLAA AEDLFASQGL SVPLDEIARA AGVGAGTVYR HFPTKDALFE AVMAQRIEQL GASAVSALEC EDAESAFYEF LAHAMEQARL NRALCDAMAR HDEWRAAAET TGPHCRFTDA FERLLRRAQT AGAVRTDVDV DDLAALIPGY VAMVAHREDE AGARRIRMLL WDGLRPPGTK RNPAPFRNET PVSIPDRNET RPRCETCDSP IHTANTGRPA RYCSPACRQK AHRRRATART RQPVSLRTRS LHVGQSEFAF AFRFTVADGR ITHYIPHEDS LALSRAYAD
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