Gene Snas_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3880 
Symbol 
ID8885080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4146067 
End bp4146570 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512628 
Protein GI291301350 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.628101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGTC AGGCCTATGC CGCCGCCAGC GAGTTCGTGA CCACCGGTGG AGAACTGGCG 
GCCCTGATAG CCGCGGGCGC CTTCGCGGCT CTGGCGTTGG TGCTGGCCTA TGTGCTGCTC
GGTCTGCGCA AGACCGTCAA CGCCGCGACC CGCGCCGTCA ACGACCTCAA CGCGCGCACC
GGCCCGCTGC TGCAAAAAGC CAACACCACA ATGGATCATG TCAACACCGC GCTGACGCAG
GCCCACACGT CGCTGGACGC GGTGAACACC CAGCTGGAAC GGGTCGACAC GATCACCGGC
CACGCGCAGC AGGTCACCGG CAACGTCGCC AACATCACCA GCCTCGTCGG GGCCGCGGCC
ACCACACCGC TGGTGAAACT GGCCGCCTTC GGCTTCGGGC TGCGCAAGGC GCTGGCCAAG
CGCCGCGCCG ACGACGACGA GCGCGAAGTG CGAAACCTGT TGAAGGACAA GAAGTCCCGC
CGTAAGCGTT CTAAGAACGG GTAA
 
Protein sequence
MSGQAYAAAS EFVTTGGELA ALIAAGAFAA LALVLAYVLL GLRKTVNAAT RAVNDLNART 
GPLLQKANTT MDHVNTALTQ AHTSLDAVNT QLERVDTITG HAQQVTGNVA NITSLVGAAA
TTPLVKLAAF GFGLRKALAK RRADDDEREV RNLLKDKKSR RKRSKNG