Gene Snas_3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3852 
Symbol 
ID8885052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4112043 
End bp4112555 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content68% 
IMG OID 
ProductRNA polymerase sigma-24 subunit, ECF subfamily 
Protein accessionYP_003512601 
Protein GI291301323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCCG AGCACGAATC CGAGTACTGC GATTACGCCG CCAACCGGCT GGTGCCGATG 
CGGCGGTTCG CGTACCTGGT GTGCGGTGAC TGGCATCGCG CCGAGGACGC GGTCCAGAAC
GCGTTCGTGA AGCTGTACCT GGCCTGGGCC CGCGCGCAGC GAGCCGACTC GCTGGACGCG
TACACCCGGC GGATCGTGCT CAACTGCGTC AAGGAGGTGC AGCGGCGGCA CTGGTTCACG
CGCGAACGGT CGACGAGCGA ACCGCCCGAT CGCGCCGCGA CCGGTGACAC CGGCTCCGAG
GAGCGGCGGC TGGTGCTGGA TGCCTTGGCC CAGTTGCCGA TGCGCCGCCG GGCGACGCTC
GTCCTGCGTT ACTGGGAGGA CCTGTCGGTC GAGCAGACCG CGCGCGTCCT GCGCTGTTCT
CCCGCCACCG TCAAGAGTCA GACCGTGCGA GGCCTGCGAA CACTGCGCGG TCTGCTGACG
GACTCGTTTC GCGAACAGAT CGAAAGGACC TGA
 
Protein sequence
MRPEHESEYC DYAANRLVPM RRFAYLVCGD WHRAEDAVQN AFVKLYLAWA RAQRADSLDA 
YTRRIVLNCV KEVQRRHWFT RERSTSEPPD RAATGDTGSE ERRLVLDALA QLPMRRRATL
VLRYWEDLSV EQTARVLRCS PATVKSQTVR GLRTLRGLLT DSFREQIERT