Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3848 |
Symbol | |
ID | 8885048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4108044 |
End bp | 4108922 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | RNA polymerase sigma-24 subunit, ECF subfamily |
Protein accession | YP_003512597 |
Protein GI | 291301319 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGG CGACCGAGCT CTTCGAGCAA CACCGGAACC TGCTGTTCTC GGTGGCGTAC CGGATGCTCG GCTCGGCCGC CGACGCCGAG GACGTCGTCC AGGACTCCTG GCTGAAGTGG TCGGCCGTCG ACCTGGACAC GGTGGACTCG CCCAAGGCGT ACCTGGTGCG CATCGCCAGC AACACCGCGC TCAACCGGCT GAAGTCCGCC CAGGTGCAAC GCGAGTCCTA TGTGGGGCCG TGGTTGCCGG AACCGATACT CACCTCCCCC GACATCGCCG AGGACGTGGA AATGGCCGAC TCCGTCTCGA TGGCGATGCT GGTCGTCCTC GAATCGCTGA CCCCCGAGGA GCGGGCGGTG TTCGTGCTGC GGGAGGTCTT CGGGTTCCCG CACACCGAGA TCGCCAGCGC CCTGGACCGT CCCGAGGCCA GCGTGCGGCA GTTGGCGCAC CGGGCCCGCT CGCACGTGCA GGCCCGCAGG CCCCGCTTCG ACGCCGACCG CGAGAAGCAG AAGCAGGCCA CCGAGGAGTT CCTGTCGGCC GCCGCGGGCG GCGACATCAA CCGCCTCATG GAGATCCTCG CCCCCGACGC GGCACTGTGG ACCGACGGCG GCGGCAAGGT CAAGGCACCG CTGCGCGACA TCCACGGCGC GCACAGGATC GCGAACTTCT TCGTCAAGGT CGCGACCCAG CCGTGGCAGG GCTACCGCCC CGAACAGTGG GAGTTCGCCG CCGCGCAGAT CAACGGGGCC AACGGCGTCC TGATCCGGGT CGAGGGCAAG GTCGTCACCG CGTTCACCAC CGAGGTCCTC GACGGCCGCA TCACGGCGAT CCACCTGGTC GGCAACCCGG ACAAACTGGC CCACCTCGAC GAGGATTAG
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Protein sequence | MATATELFEQ HRNLLFSVAY RMLGSAADAE DVVQDSWLKW SAVDLDTVDS PKAYLVRIAS NTALNRLKSA QVQRESYVGP WLPEPILTSP DIAEDVEMAD SVSMAMLVVL ESLTPEERAV FVLREVFGFP HTEIASALDR PEASVRQLAH RARSHVQARR PRFDADREKQ KQATEEFLSA AAGGDINRLM EILAPDAALW TDGGGKVKAP LRDIHGAHRI ANFFVKVATQ PWQGYRPEQW EFAAAQINGA NGVLIRVEGK VVTAFTTEVL DGRITAIHLV GNPDKLAHLD ED
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