Gene Snas_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3838 
Symbol 
ID8885038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4096469 
End bp4097434 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content67% 
IMG OID 
ProductMg2 transporter protein CorA family protein 
Protein accessionYP_003512587 
Protein GI291301309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.547089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGT GGTGGCGTTG CGACGCCGAG GGGATCCGGC CGGGGGAGAA GTCAGTGGAT 
TTCGCCACCG TGCCGGATTC GCTGCCGCCG GGCGGTTTCG CGTGGGTCGA ACTGACCGAA
CCCGACGCCG CCGAACTGGA ACGCCTCGTC ACGGTGCTGC GGCTACCACC GTTCGTCATC
CACGACGCGA TCTCCGCCCA CCGTCGCCCC CGCCTCGACG CCTACGGCGA CGTCATGTCC
ATGGTGGTCA AATCGGTGTG GTACCTCGAC GGCACCTCCG ACGTGGAGAC CGGTGATGTC
ACCTTCCTGC TCAACCGGTG GCTGCTGGTG ACCGTCCGAC ACGGCGACGG CGACCCGATG
CCCGACGCCC GCGCCCGGCT CGAACACAAC CCCAAACTGC TGCGCCTGGG AACCCGGGGC
GCGGCCTACG CCGTCGTCGG CACCATGGTG GACACCTACC TCAAGGTGTC CGAGGAGATC
GAGACCGACG TGACCGAACT GGAGCGCGCG GTGTTCAGCC CCGGCCGGGT CAAACGGGTG
GAACAGCTGT ACTCGCTGCA ACGCGAGGTC CTGGAGTTCC GGGAAGCCGT GCAGCCCATG
GACGTCATCG CCGACGAACT CCTGTCACAC CACGACCGCC GCGACGCGGT CACCCCGTTC
GTCCGCACCC TGGCCCACCG CGTCAAACGC GCCGGCGACT CGGCGGCCCG CAGCGAGAAC
CTGCTCAACG CGATCCTGCA GGCCCACCTC GGCCAGATCG GCATGTGGCA GAACGAGGAC
ATGCGCAAGA TCTCGGCGTG GGCAGCCATC ATCGCCGCCC CCACCATGAT CGCCGGGATC
TACGGCATGA ACTTCAAGCA CATGCCCGAG CTCAACTGGG TGGTCTCCTA CCCGGCGGTA
CTGCTCCTGA TGGCCGTGAT CTGCTGGCTG CTGCACCGAG GCTTCAAACG CAACGGCTGG
CTGTAG
 
Protein sequence
MLTWWRCDAE GIRPGEKSVD FATVPDSLPP GGFAWVELTE PDAAELERLV TVLRLPPFVI 
HDAISAHRRP RLDAYGDVMS MVVKSVWYLD GTSDVETGDV TFLLNRWLLV TVRHGDGDPM
PDARARLEHN PKLLRLGTRG AAYAVVGTMV DTYLKVSEEI ETDVTELERA VFSPGRVKRV
EQLYSLQREV LEFREAVQPM DVIADELLSH HDRRDAVTPF VRTLAHRVKR AGDSAARSEN
LLNAILQAHL GQIGMWQNED MRKISAWAAI IAAPTMIAGI YGMNFKHMPE LNWVVSYPAV
LLLMAVICWL LHRGFKRNGW L