Gene Snas_3836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3836 
Symbol 
ID8885036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4093296 
End bp4095773 
Gene Length2478 bp 
Protein Length825 aa 
Translation table11 
GC content71% 
IMG OID 
ProductATPase AAA-2 domain-containing protein 
Protein accessionYP_003512585 
Protein GI291301307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.493394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGG ACACCTTCGC GGGGGCGGGC GCGTTCGACG ACATCGTCAA CCGGTTCTTC 
GGCCGCGACC CGTTCGGCGA CCGGCCGGTG CAGCGCGTCG ACCTGACCCG GCTGCTGTCG
GACCAGTCGC GGCGGCTGCT GCGCCGGGCC GTCGAGCACG CCCAGGAACG CGGCCAGGAC
GTCGACGTGA CGCACCTGCT GTGGTCGGCC TGTCAGGACG ACCCGGCCCG GTCGATGCTG
TCGCAGGCCA ACGCCGATCC CGACGAGCTG GCGTCCAGGA TGGACGCGGC GGCGGGTGAG
CCGGGTGAGT CCACTCAGGA GGTGCCGCCG CTGACGCCCG CCGCCAAACG GGCGCTGCGG
GACGCGCACG CGCAGTCGCG GGCCGCCGGG GTGGGCTACA TCGGACCCGA GCACATCATC
CTGGGTATCG CGGCCAATCC GGATACCGAG GCGGGCAGGG CATTGCGGTC ACTGGCGGCC
GACAACGGCG GCGGCGAGGC CGGTGGCGGT CCGGGCGGCG CCAGCGCCAC GCCGACCATC
GACCAGTACG GCCGCGACCT GACCGAGGAG GCCCGGCAGG GCGGCCTCGA CCCGGTGGTG
GGTCGCGAGG AGGAGATCAC CGACACCGTC GAGATCCTGT CGCGCCGCAC CAAGAACAAC
CCGGTGCTGA TCGGGGAACC CGGGGTCGGC AAGACGGCCA TCGTGGAGGG TCTGGCACAG
CGCGTCGTCA ACGGCGACGT GCCGGAGACC TTGCGGGACA AGCGGGTCAT CGTGCTGGAC
CTGGCGGGTC TGGTGGCGGG CAGCAAGTAC CGCGGCGAGT TCGAGGAACG GCTGAAGAAC
GTCATCGATG AGGCCAAGGC TGCCGAGGGC GGGCTGATCC TGTTCCTCGA CGAGATGCAC
ACCGTGGTGG GCGCGGGCGG CGGCGAGGGC TCCATGGACG CGTCCAACAT GCTCAAACCG
GCGCTGGCGC GCGGCGAACT GCACGTGGCC GGGGCGACCA CTCTGGACGA ATACCGCAAG
CACGTGGAGA AGGATCCGGC GCTGGAGCGG CGGTTCCAGC CGGTGCTGGT ACCTGAGCCC
ACAGTAGACG AGACGGTGGA GATCCTGCGG GGGCTGCGGG ACCAGTACGA GGCGCACCAC
CAGGTGAGCT TCACCGACGA GGCGCTGACG GCCGCCGCGC AGCTGTCGGC GCGGTACATC
ACCAACCGGT TCCTGCCCGA CAAGGCCATC GACCTCGTCG ACCAGGCGGG GGCCCGGGTG
CGGCTGCGGT CGCGCACGCC CGCGCCCGAC ACCCGTCAGA TCACCGACGA GCTGGCCCGG
TTGCGGGCCG ACAAGGACGC CGCCGTCGAC GCCGAGGACT ACACGCGGGC CTCGGAGTTG
AAGGTCGAGA TCGCCGCCGC CGAGGCCCGG CTGGCCGAGG CGTCTTCACA ACCACCGCCG
ACGCCGAAGG TGGAGGTGGC CGACATCGCC GAGGTCATCA GCCGCCGCAC CGGAATCCCG
GTGGCGCAGT TGACCGAGGC CGAGAAGTCG CGGCTGCTGA AACTGGAACA GCACCTGCAC
GACCGGGTGG TGGGCCAGGA CGAGGCGGTG GCGGCGGTCG CCGAGGCGGT GCGCCGGGCT
CGCGCGGGTC TGGGCGACCC GAAGCGGCCC GACGGTTCGT TCATGTTCCT GGGCCCCACC
GGGGTCGGCA AGACCGAGCT TGCCCGGGCG CTGGCCGATG CCCTGTTCGG CGACGAGGCC
AGCATGGTCC GGTTCGACAT GTCGGAATTT CAGGAGAAGC ACACGGTGTC GCGGCTGGTG
GGCGCGCCGC CCGGCTACGT CGGTTACGAC GAGGCCGGTC AGCTCACCGA GGCGGTCCGC
AGGCGCCCCT ACCGGGTGCT GCTGTTCGAC GAGGTCGAGA AGGCCCACCC GGACGTGTTC
AACACGCTGC TGCAACTGCT GGACGATGGG CGGCTCACCG ACGCGCAGGG CCGCACGGTC
GACTTCTCCA ACACGATCGT CATCATGACC TCCAATGTGG GCGCCGATCG GATCTTGGCC
GCGCAGAGCG CCGGCCAGCC GGTCGACGCG CTGCGCGACA AACTGATGGA CCAACTGGGG
CAACGGTTCC GGCCGGAGTT CCTCAACCGC ATCGACGAGA TCATCCTGTT CTCCGGGCTG
GATCGCACCC AGCTGCGGCA GATCACCGAA CTGTTCGTCG ACCGCACCCG CCGTCGCCTC
AAGGCGCAGG ACATCGGGCT GCGGCTGTCC GACGACGCCC TGGAGTGGCT GTCCAACCGG
GGCTACCAGC CGGAGTTCGG TGCCCGCCCG CTGCGGCGCA CGATCCAGCG GGAGCTGGAG
AACAAGGTGT CCCATCTGGT GCTGTCGGAC ACGGTGTCCG AAGGCGACAC GATCGGCGTG
GACGTCGTCG ACGGCGAACT GTCGCTGTCG GTGGAACCGC GCGCCTCAAC CGAGGCGATC
GCGGAGGCGA CCGGCTAG
 
Protein sequence
MSMDTFAGAG AFDDIVNRFF GRDPFGDRPV QRVDLTRLLS DQSRRLLRRA VEHAQERGQD 
VDVTHLLWSA CQDDPARSML SQANADPDEL ASRMDAAAGE PGESTQEVPP LTPAAKRALR
DAHAQSRAAG VGYIGPEHII LGIAANPDTE AGRALRSLAA DNGGGEAGGG PGGASATPTI
DQYGRDLTEE ARQGGLDPVV GREEEITDTV EILSRRTKNN PVLIGEPGVG KTAIVEGLAQ
RVVNGDVPET LRDKRVIVLD LAGLVAGSKY RGEFEERLKN VIDEAKAAEG GLILFLDEMH
TVVGAGGGEG SMDASNMLKP ALARGELHVA GATTLDEYRK HVEKDPALER RFQPVLVPEP
TVDETVEILR GLRDQYEAHH QVSFTDEALT AAAQLSARYI TNRFLPDKAI DLVDQAGARV
RLRSRTPAPD TRQITDELAR LRADKDAAVD AEDYTRASEL KVEIAAAEAR LAEASSQPPP
TPKVEVADIA EVISRRTGIP VAQLTEAEKS RLLKLEQHLH DRVVGQDEAV AAVAEAVRRA
RAGLGDPKRP DGSFMFLGPT GVGKTELARA LADALFGDEA SMVRFDMSEF QEKHTVSRLV
GAPPGYVGYD EAGQLTEAVR RRPYRVLLFD EVEKAHPDVF NTLLQLLDDG RLTDAQGRTV
DFSNTIVIMT SNVGADRILA AQSAGQPVDA LRDKLMDQLG QRFRPEFLNR IDEIILFSGL
DRTQLRQITE LFVDRTRRRL KAQDIGLRLS DDALEWLSNR GYQPEFGARP LRRTIQRELE
NKVSHLVLSD TVSEGDTIGV DVVDGELSLS VEPRASTEAI AEATG