Gene Snas_3818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3818 
Symbol 
ID8885018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4074907 
End bp4075602 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content69% 
IMG OID 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_003512567 
Protein GI291301289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.419873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0855026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGATCG AGAGCGTGGT CGCCGAGGCC TTCGCCACAA ATTGTTATGT GGTTGCGACC 
GGCGCCGGTT CCGAGTGTGT CGTCATCGAC CCGGGCATCG GGATCGCGTC GCGGTTGGAG
AAGCTGCTCG CGGACAAGCG GCTGCGGCCC GTCGCCGTCA TGTTGACCCA CGGGCACTTC
GACCACACCT TCTCGGTGGT GCCGGTGTGC GGGGCGCGGG GCATCTCGGC GTACGTCCAC
CCCGGCGACC GCGGCCAGCT GGTCGATCCG TTCTCGGGGT TGCCGCCGCA GTTCAAGGCC
ATGGCCGGGG GACTGGAGTG GGCCGAGCCC GACGACGTTG AGGAACTGCC GCAGACCGGG
CCGTTGAACC TGGCGGGCAT CGACTTCACC GTCGACCACG CTCCCGGGCA CACTCCCGGA
TCGGTGCTGT TTCGCGCCAG TGACGACGAG GCCGACTACT GCCTGTCGGG CGACGTCCTG
TTCGCCGGTT CCATCGGACG CACCGACTTC CCCGGTGGCG ACAACGCCGC CATGGAGCGG
TCGCTGGCCG ACAAGATCCT GCCCCTCGAC GACGCGACCG TCGTGTTGCC GGGCCACGGA
CCGGCCACCA CGATCGGGGC CGAGCGTCGC GGCAACCCGT TCCTGCGCCG AATCGTCGAC
AGCGGCCATA TGGAGGCACC GACGCGCGGT CTGTGA
 
Protein sequence
MLIESVVAEA FATNCYVVAT GAGSECVVID PGIGIASRLE KLLADKRLRP VAVMLTHGHF 
DHTFSVVPVC GARGISAYVH PGDRGQLVDP FSGLPPQFKA MAGGLEWAEP DDVEELPQTG
PLNLAGIDFT VDHAPGHTPG SVLFRASDDE ADYCLSGDVL FAGSIGRTDF PGGDNAAMER
SLADKILPLD DATVVLPGHG PATTIGAERR GNPFLRRIVD SGHMEAPTRG L