Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3815 |
Symbol | |
ID | 8885015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4071241 |
End bp | 4072995 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Na+/solute symporter |
Protein accession | YP_003512564 |
Protein GI | 291301286 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00808534 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCTGT TGGCAGCCGG TGGAGTCGAC GCCACCTCGC GCACCCTCAC CATCGTCCTT TTCGTCGTCC TGGTGGCCGT CACCCTGTTC GTGACCGTCA TGGCCGGGCG CAAGACCTCC ACCGCGACCG ACTTCTACGC GGGCGGACGC GGCTTCTCCG GATTCCAGAA CGGCATGGCC ATCGGCGGCG ACTACATGTC CGCCGCGTCC TTCCTGGGCA TCGCCGGGAT CATCGCACTG TCGGGATACG ACGGTTTCCT GTACTCCATC GGGTTCCTGG TCGCCTGGCT GATCGCGCTG CTGCTGGTGG CCGAACTGCT GCGCAACTCC GGCAAGTACA CGATGGCCGA CGTGCTGGCG TTTCGGATGC GGCAGCGCCC GGTGCGCACC GCCGCGGCGG TCTCCACCGT CACCGTGTCG ATCTTCTACC TGCTGGCGCA GATGGTCGGC GCCGGAGCCC TGGTGGCACT GCTGTTGGGC ATCGGCGAGA ACGAGACCTT CCTGGGCATG AGCGCCGGGG CCGCCAAGAA CCTGACCATC ATCCTGGTCG GCGCGCTCAT GATCACCTAC GTGGTCGTCG GCGGCATGAA GGGCACCACC TGGGTCCAGA TCATCAAGGC CGTACTGCTC ATGGTGGGCG CGGCGCTGAT GACGCTGCTG GTGCTGATCG CCTTCGGGTT CAACATCTCC TCGCTGCTGG GCAAGGCCGC CGAGGCCTCG GGCAAACCCG GCGACAGCTT CCTGGTGCCG GGCCTGAAGT ACGGCGTCGA ATCCGGCGAC GCCTTCAAGA CCCTGATGAG CAAACTGGAC CTGCTGTCGC TCGGGTTGGC GCTGGTGCTG GGAACCGCGG GCCTGCCGCA CATCCTGATC CGGTTCTACA CCGTCCCCAA TGCCAAGACC GCCCGCAAGA GCGTGCTGTG GGCGATCGGC ATCATCGGCA CCTTCTACCT GATGACGCTG GCGCTGGGCT TCGGTGCCGC CGAGATGGTC GGCAGCGCGG CGATCGCCAA GCAGGACAAG GGCGGCAACA CCGCCGCGCC ACAGTTGGCC CAGGCGCTGG GGGAGCGATT CCTTGGCGGA GACGTGGGCG GGGCGGTGCT GCTGGCACTG ATCGCCGCCG TCGCCTTCGC CACCATCCTG GCCGTGGTCG CGGGGCTGAC GCTCGCGTCG TCCTCGTCGC TGTCGCATGA CCTGTACGCC AACGTCTACC GGGGCAGCGG TCTGGCCAAG ACGTTGCGGC TGGGTTGGGT GTTCAGCCTG CTCGGCAAGG GCCGCACCAC GAACGGCGAG GCCCGCGAGG TCCTGGTGGC CCGGCTGGCC GCCGTCGTCA TCGGCATCGC CGCGATCGTG CTGGCCATCT TCGCCCAGGG GCTGAACGTG GCCTTCCTGG TGGCGCTGGC CTTCGCGGTC GCCGCGTCGG GCAACCTTCC GGCCATTTTG TACAGTCTGT TCTGGAAGAG GTTCACCACC CGCGGCGCGA CCTGGGCCAT CTACGGTGGA CTGTTGACCG CGGTGATCCT GGTGATCTGC TCGCCGATCG TCACCGGTGG CAAGCTCGAC CCGGCCGGTA AACCCGCGGC CCTGTTCCCG GGCGTCGACA TCGCCTGGTT CCCGCTGGAG AACCCCGGCC TGGTGTCGAT CCCGGCGGGC TTCTTCTTCG GCTGGCTGGG CACCGTGCTG TCCCGGGAGA AGCCGGACGT GGAGAAGTAC GCCGAACTCG AGGTCCGTTC CCTCACCGGG GTCGGAGCTC ACTGA
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Protein sequence | MNLLAAGGVD ATSRTLTIVL FVVLVAVTLF VTVMAGRKTS TATDFYAGGR GFSGFQNGMA IGGDYMSAAS FLGIAGIIAL SGYDGFLYSI GFLVAWLIAL LLVAELLRNS GKYTMADVLA FRMRQRPVRT AAAVSTVTVS IFYLLAQMVG AGALVALLLG IGENETFLGM SAGAAKNLTI ILVGALMITY VVVGGMKGTT WVQIIKAVLL MVGAALMTLL VLIAFGFNIS SLLGKAAEAS GKPGDSFLVP GLKYGVESGD AFKTLMSKLD LLSLGLALVL GTAGLPHILI RFYTVPNAKT ARKSVLWAIG IIGTFYLMTL ALGFGAAEMV GSAAIAKQDK GGNTAAPQLA QALGERFLGG DVGGAVLLAL IAAVAFATIL AVVAGLTLAS SSSLSHDLYA NVYRGSGLAK TLRLGWVFSL LGKGRTTNGE AREVLVARLA AVVIGIAAIV LAIFAQGLNV AFLVALAFAV AASGNLPAIL YSLFWKRFTT RGATWAIYGG LLTAVILVIC SPIVTGGKLD PAGKPAALFP GVDIAWFPLE NPGLVSIPAG FFFGWLGTVL SREKPDVEKY AELEVRSLTG VGAH
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