| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3807 |
|---|
| Symbol | |
|---|
| ID | 8885007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4060594 |
|---|
| End bp | 4065102 |
|---|
| Gene Length | 4509 bp |
|---|
| Protein Length | 1502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | Glutamate synthase (ferredoxin) |
|---|
| Protein accession | YP_003512556 |
|---|
| Protein GI | 291301278 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.344591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00201054 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCGATCTT CCGTACCCTC ATTCACTTCG CCGCCAGCCG ACCGCCACAC AGCGTCCGCG
GGCCTGTACG ACCCGGCCAA CGAACACGAC GCCTGCGGCG TGGCCTTCGT CGTCGACGTC
GCCGGGCACC GCGCCCACCG CATCGTCGAG GCCGGACTGT CCAGCCTGTG CCGGATGTCC
CACCGGGGCG CGGCCGGAGC CGACCCCGAC TCCGGCGACG GCGCCGGGAT CATGCTGCAG
GTCCCCGACG AGTACTACCG CGCCGTCACC GACTTCGCGC TGCCCGAGCC GGGCGGTTAC
GCCACCGGGC TGGTGTTCTG CGGCCCCGAC ACCGCCGAGC GGGTGCGCGG CGTGCTCGCC
AAATACGCCG TCACCGAGGG CATGACCGTG CTGGGCTGGC GTGACGTCCC CGTCGACCCC
TCCTGTCTGG GCCCGGCCTC GCTGGCCGCC GCACCGGAAG TTGTCCAAGT GTTCATGGCC
GCCGACGACG GTTCGCGCGG CATCGAACTC GACCGGCGCG CGTTCGCCGT CCGCAAACAG
GCCGAACGCG AGCTGCGGGA ACGCTCCTGC GACGCCGCCG TGATCTCGCT GTCCTCGCGC
ACCATCGTCT ACAAGGGCAT GCTGACGCCC GCGCAGCTGG GCACCTTCTA CCCCGAACTG
CACGACGAGC GCCTCGACAG CGCGCTGGCG CTGGTGCACA GCCGGTTCTC CACCAACACC
TTCCCGTCCT GGCCGCTGGC CCACCCCTAC CGGATGGTCG CCCACAACGG CGAGATCAAC
ACCATCCGCG GCAACCGCAA CTGGATGACC GCCCGGCAGG CACAGCTGGC CACCAGCGCC
CTGCCCGGCC GACTGAAGCG GCTGTACCCG ATCTGCACCC CCGGCTCCTC CGACTCGGCG
AACTTCGACG AGGTCGTCGA GCTGTTGCAC CTGGGCGGGA GGTCGCTGCC GCACGCGATG
CTGATGATGA TTCCCGAGGC CTGGGAGTCA CACGCCACCA TGGACCCCAA GCGGCGCGAG
TTCTACCGCT TCCACGCCTC CATGATGGAG CCCTGGGACG GACCGGCCTG TGTGGCCTTC
ACCGACGGCA CCCAGATCGG CGCCGTCCTG GACCGCAACG GCCTGCGCCC GGCCCGATGG
TGCCGCACCA CCGACGGCCT GGTCGTCTTG GCCAGCGAGT CCGGGGTCGT GGACCTGCCG
CCGGAGTCCA TCGCCGAGAA GGGACGGCTG ACCCCGGGCC GGATGTTCCT GGTCGACACC
GCCGAGAAGC GCATCATCGC CGACGACGAG ATCAAGGACG CCCTGGCCTC CGAGCATCCC
TACGCCGACT GGACCCACGC CGGACTGAAC CATCTGGACT CGCTGCCCGA ACGCGAGCAC
ATCGTCCACA CCCACGACTC GGTGCGCCGC CGCCAGCGCG TCTTCGGCTA CACCGAGGAG
GAGCTGCGGA TGCTGCTGGC GCCGATGGCC GCCACGGCCG CCGAACCGGT GGTGTCCATG
GGAACCGACA CCCCGGTGGC CAGCCTGTCG AAGCGGCCCC GGCTGCTGTA CGACTACTTC
ACCCAGCTGT TCGCGCAGGT CACCAACCCG CCGCTGGACG CCATCCGGGA GGAACTGGTC
ACCTCGCTGG GCGTCACGAT CGGGCCCGAG CACAACCTGC TGGAGCCCTC GGCCGCGTCC
TGCCGCCAGA TCGAACTGTC CTATCCGGTC ATCGACAACG ACGAACTGGC CAAGATCCTG
TCCATCGACG CCGACGGCGA CATGCCCGGC TTCAAGGCGG TGCGGGTGTC GGGCCTGTAC
AAGGCCCGGC TCGGCGCGGC CGGGATGAAG GCCCGGCTCG TCGAGATCTG CCGCCACGTC
TCCGAGGCCA TCGAGGACGG TGTCCGGATC CTGGTGCTGT CCGATCGCGA CTCCACCCGC
GACCTGGCGC CGATCCCGTC GCTGCTGCTG ACCGCCGCGG TGCACCAGCA CCTGGTGCGC
GAACAGACCC GCACCCAGAT CGCGCTGGTC GTCGAGACCG GCGACTGCCG CACCGTGCAC
CACGCGGCGG TGCTGCTGGG CTACGGCGCC GCGGCCATCA ACCCCTACCT GGCGTTCGAG
TCCATCGAGG ACATGATCGC CACCGGCGCG CTGGAGGCCG ACCCGGCCGT CGCGATCCGC
AACTACGTCA CCGGCCTGTG CAAGGGCGTA CTGAAGATCA TGTCCAAGAT GGGCATCTCG
ACGGTGTCGT CCTACTGCGG CGCCCAGGTC TTCGAGGCCG TCGGTCTCGA CGCCAACTTC
ACGCACCGGT ACTTCACCGG CACCGACTCC CGCATCGGCG GCGCCGGGCT GGCCGACATC
GCCGCCGACG TCGCCGAACG CCACGCCCAC GCCTACACCG ACGGCGCCGA GCTCGACGTC
GGCGGCGAGT ACCAGTGGCG CCGCGACGGT GAGGTGCACC TGTTCAACCC GGAGACGGTG
TTCCTGCTCC AGCACTCCAC CCGCTCGGGC CAGTACGACG TGTTCAAGAA GTACACCTCC
AAGGTGGACG CCCTGACCGC CGACAGCGGT TCGCTGCGCG GCCTGCTCGA CTTCGCCGAG
GGCCGCACCC CGATCCCGAT CGACGAGGTC GAGGACGTCG ACACGATCGT GCGTCGCTTC
TCCACCGGCG CGATGTCCTA CGGGGCGCTG TCGGCCGAGG CCCACGAGAC GCTGGCCATC
GCCATGAACC GCCTGGGCGG CAAGTCCAAC AGCGGCGAGG GCGGCGAGGA CGTCGACCGG
CTGTACGACC CGCTGCGCCG CAGTGCCGTC AAACAGGTCG CCTCGGGCCG CTTCGGCGTC
ACCAGCGAAT ACCTCGTCAA CGCCGACGAC ATTCAGATCA AGATGGCCCA GGGCGCCAAG
CCCGGCGAGG GCGGACAGCT GCCGGGTAAC AAGGTGTACC CGTGGATCGC CTCCACCCGG
CACGCCACCC CCGGCGTCGG CCTGATCTCA CCGCCGCCGC ACCACGACAT CTACTCCATC
GAGGACCTGG CGCAGCTGAT CCACGACCTC AAACACGCCA ACCGGGACGC CCGCATCCAC
GTCAAACTCG TGTCCGAAGT GGGCGTCGGT ACGGTCGCGG CCGGGGTCGC CAAGGCGCAC
GCCGACGTCG TCCTCATCTC CGGGCACGAC GGCGGCACCG GCGCGGCACC GGCCAACTCC
GTCAAACACG CCGGGGCGCC CTGGGAGATC GGACTGGCCG AGACCCAGCA GACCCTGCTG
CGCAACGGTT TGCGCGACCG GGTGAGCCTC CAGGTCGACG GCGCCATGAA GACCGGACGC
GACGTTGTGG TCGCCGCGCT GTTGGGTGCC GAGGAGTACG GCTTCGCCAC CGCGCCGCTC
ATCGTGTCCG GCTGCGTCAT GATGCGGGTG TGCCACCTGG ACACCTGCCC GGTCGGCGTG
GCCACACAGA ATCCCAAGCT GCGCGAGAAC TTCACCGGCA AGGCCGAGTT CGTGGAGAAC
TTCTTCCGCT ACATCGCCGA AGAGGTGCGG GAGCTTTTGG CCAGCCTCGG CATGCACAGC
CTCGACGAGG CCATCGGCCA CACCGAACTG TTGCGCCGCC GCGAGAGCAT CAACGACCCC
AAGGCCGCGG CCCTGGACCT GTCGAACCTG CTGTGGCGGC CCGAACTGCC CGAGGGCGCC
AGCCTGCGCC GCTCCCGCGA CCAGGAACAC GAACTGGACG ACACCCTCGG CCAGCGGCTG
GTGGAACTGG CCGCACCGGC GCTGACCAGC GGCGACCCGA TCGAGATCGA CGTCGATGTC
GCCAACACCG ACCGTTCCGT CGGCACCCTT TTGGGCTCGC AGGTCACCCG CCGGTTCCGC
GACGGCCTGG CCGCCGACAC CATCACGGTG CGGCTGCGCG GCACCGCGGG CCAGTCCTTC
GCGGCGTTCC TGCCCGCCGG GGTCACGCTG CGGCTGTCCG GCGACGCCAA CGACTATGTC
GGCAAGGGAC TGTCGGGCGG GCGGGTCGTG GTGCGGCCCG ACGAGGCGGC CGAGTTCGCC
GCCGAGGACA ACATCATCGC GGGCAACACG CTGCTGTACG GCGCCACCTC CGGCGAGCTG
TACTGCCGGG GCCGGGCCGG GGAGCGCTTC GCGGTCCGCA ACTCCGGGGC GGTCGCGGTC
GTCGAGGGCG TCGGTGACCA CGGCTGCGAG TACATGACCG GCGGCACTGT CGTGGTGCTG
GGACCGACCG GCCGCAACTT CGGCGCGGGG ATGTCCGGCG GACAGGCCTA TGTGCACCGG
CTCGACCCGG CGCGCGTCAA CCAGACCCTG GTGGACCTGG ACGATCTGGG CGCCAGCGAC
ATCGCCGAAC TCCACAAGCT GCTGCGGCAG CACCGGGACG AGACCGGTTC GGCCGTCGCG
GCTCGGCTGC TGTCGGACTG GCCACGCGCC GCCGGCGGCT TCACCAAGGT CATCCCCGTC
GAGTACAAGC GCGCGCTGGC TGCCGCCGAG CGCGCCGAAG CCGAGGCAAT GGAGGCGCGT
CATGGCTGA
|
|---|
| Protein sequence | MRSSVPSFTS PPADRHTASA GLYDPANEHD ACGVAFVVDV AGHRAHRIVE AGLSSLCRMS
HRGAAGADPD SGDGAGIMLQ VPDEYYRAVT DFALPEPGGY ATGLVFCGPD TAERVRGVLA
KYAVTEGMTV LGWRDVPVDP SCLGPASLAA APEVVQVFMA ADDGSRGIEL DRRAFAVRKQ
AERELRERSC DAAVISLSSR TIVYKGMLTP AQLGTFYPEL HDERLDSALA LVHSRFSTNT
FPSWPLAHPY RMVAHNGEIN TIRGNRNWMT ARQAQLATSA LPGRLKRLYP ICTPGSSDSA
NFDEVVELLH LGGRSLPHAM LMMIPEAWES HATMDPKRRE FYRFHASMME PWDGPACVAF
TDGTQIGAVL DRNGLRPARW CRTTDGLVVL ASESGVVDLP PESIAEKGRL TPGRMFLVDT
AEKRIIADDE IKDALASEHP YADWTHAGLN HLDSLPEREH IVHTHDSVRR RQRVFGYTEE
ELRMLLAPMA ATAAEPVVSM GTDTPVASLS KRPRLLYDYF TQLFAQVTNP PLDAIREELV
TSLGVTIGPE HNLLEPSAAS CRQIELSYPV IDNDELAKIL SIDADGDMPG FKAVRVSGLY
KARLGAAGMK ARLVEICRHV SEAIEDGVRI LVLSDRDSTR DLAPIPSLLL TAAVHQHLVR
EQTRTQIALV VETGDCRTVH HAAVLLGYGA AAINPYLAFE SIEDMIATGA LEADPAVAIR
NYVTGLCKGV LKIMSKMGIS TVSSYCGAQV FEAVGLDANF THRYFTGTDS RIGGAGLADI
AADVAERHAH AYTDGAELDV GGEYQWRRDG EVHLFNPETV FLLQHSTRSG QYDVFKKYTS
KVDALTADSG SLRGLLDFAE GRTPIPIDEV EDVDTIVRRF STGAMSYGAL SAEAHETLAI
AMNRLGGKSN SGEGGEDVDR LYDPLRRSAV KQVASGRFGV TSEYLVNADD IQIKMAQGAK
PGEGGQLPGN KVYPWIASTR HATPGVGLIS PPPHHDIYSI EDLAQLIHDL KHANRDARIH
VKLVSEVGVG TVAAGVAKAH ADVVLISGHD GGTGAAPANS VKHAGAPWEI GLAETQQTLL
RNGLRDRVSL QVDGAMKTGR DVVVAALLGA EEYGFATAPL IVSGCVMMRV CHLDTCPVGV
ATQNPKLREN FTGKAEFVEN FFRYIAEEVR ELLASLGMHS LDEAIGHTEL LRRRESINDP
KAAALDLSNL LWRPELPEGA SLRRSRDQEH ELDDTLGQRL VELAAPALTS GDPIEIDVDV
ANTDRSVGTL LGSQVTRRFR DGLAADTITV RLRGTAGQSF AAFLPAGVTL RLSGDANDYV
GKGLSGGRVV VRPDEAAEFA AEDNIIAGNT LLYGATSGEL YCRGRAGERF AVRNSGAVAV
VEGVGDHGCE YMTGGTVVVL GPTGRNFGAG MSGGQAYVHR LDPARVNQTL VDLDDLGASD
IAELHKLLRQ HRDETGSAVA ARLLSDWPRA AGGFTKVIPV EYKRALAAAE RAEAEAMEAR
HG
|
|---|
| |