Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3803 |
Symbol | |
ID | 8885003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4056251 |
End bp | 4057126 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Choloyl-CoA hydrolase |
Protein accession | YP_003512552 |
Protein GI | 291301274 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.700284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0012585 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGTGAAG TGCTGACGGG ACAACCGGCG GTCGACGGGC TGCTGCGGGT CCTGGACCTG GAGCAGATCG AGCTCAACAT CTTCCGGGGT GTGGGCCCGC AGGTCTCGCC GCAGCGGGTG TTCGGCGGCC AGGTCGCCGG TCAGGCCCTG GTCGCGGCCG GACGCACGGT CGAGGCCGGG CGGCACGTCA ACTCACTGCA CGGCTACTTC GTCCGCCCCG GTGACTCCAC CAAGCCCATC GTCTACGAGG TGGAGCGCAT CCGCGACGGC CGCTCGTTCT CGGTGCGGCG CACGGTGGCC GTCCAGAACG GCCAGACGAT CTTCTTCATG TCGGCGTCGT TCCACACCGG CGAGGACGGC TTGGAGCACG GCGAGACCGC CCCGGTCGAC GTCCCGCCGC CGGTGGAGGT CCCCACGCTC ACCGAGCGGC TGGCCTCCCA TCCCGACCGG CTGGGCATCT GGGCGCGCAT CCCGCGTCCC ATCGACGTGC GCTACATCGG CGAGTCCGGT TTCGCGGCCT CGGGGGAACG CCACGCCGCC ACCCAGCAGC GGGTGTGGAT GAAGGTGGAC GGCAAACTGC CCGACGACCC GCTGCTGCAC GTGTGCGTCC TGACCTACGC CAGTGACCTG ACCCTTCTGG ACACCGTGCT GAACCGGCAC GGCCAGGTGT GGGGGCCGGG CGGCTACGCC GGTGCCAGCC TCGACCACGC GCTGTGGTTC CACCGGCCGT TCCGCGCCGA CGAGTGGTTC CTGTACGACT CGGCCAGCCC CTCGGCCTCG CGCGGGCGGG GCCTGGCCAC CGGCCAGTTC TACACCACCG ACGGCCGCCA CATCGCCACC ACGGCGCAGG AGGGAATCCT GCGCGTGACG CCGTAA
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Protein sequence | MSEVLTGQPA VDGLLRVLDL EQIELNIFRG VGPQVSPQRV FGGQVAGQAL VAAGRTVEAG RHVNSLHGYF VRPGDSTKPI VYEVERIRDG RSFSVRRTVA VQNGQTIFFM SASFHTGEDG LEHGETAPVD VPPPVEVPTL TERLASHPDR LGIWARIPRP IDVRYIGESG FAASGERHAA TQQRVWMKVD GKLPDDPLLH VCVLTYASDL TLLDTVLNRH GQVWGPGGYA GASLDHALWF HRPFRADEWF LYDSASPSAS RGRGLATGQF YTTDGRHIAT TAQEGILRVT P
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