Gene Snas_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3800 
Symbol 
ID8885000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4052028 
End bp4052591 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content67% 
IMG OID 
ProductHemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_003512549 
Protein GI291301271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000606803 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTCACCA CTGCCGAAAC CAATCTCGTC AACATCGTCG TATCCGATCA CCGGCTGCTG 
AACCGGGTCT TCACCGAGTT GCAGGACGAG AACCTCACCG GCGAGTGGCG GCGGGCGCTC
ACCGACGCCC TGGTCGCCGA ACTGGTGGGG CACCTGCTGG CCGAGGAACA CTACCTGTAT
CCGCTGGTGC GCTCCTATGT CAACAACGGC CGCGAACTGG CCGACCGGGA ACTGGCCGAA
CACGCCGAAC TCAAACGGCT CATGAAGGAG CTGGAGGAGT TCGACGGCGC CGACCCGAGG
TTCATCGCGC TGCTCGCCGA GCTGACCCGC CGGTGCCGTC GGCACATGGC CGACGAGGAG
GACGTGACAC TGCCGCTGGT CGGGGCGGCG TGCAGCCCGC TGACCCTGCA GAAGCGGGGC
GCGAAGATGC TGCGCAACAA GAAGTTCGCG CCCACCCGCC CGCACCCCGA CGCCCCGGAT
CGTCCACCCG CCAACCTGAT CGTGGATCCG GGCGCCGCGT TCGTCGACCG GCTTCGGGAT
CGCATCGACC CGACCGAGGT CTAG
 
Protein sequence
MVTTAETNLV NIVVSDHRLL NRVFTELQDE NLTGEWRRAL TDALVAELVG HLLAEEHYLY 
PLVRSYVNNG RELADRELAE HAELKRLMKE LEEFDGADPR FIALLAELTR RCRRHMADEE
DVTLPLVGAA CSPLTLQKRG AKMLRNKKFA PTRPHPDAPD RPPANLIVDP GAAFVDRLRD
RIDPTEV