Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3800 |
Symbol | |
ID | 8885000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4052028 |
End bp | 4052591 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Hemerythrin HHE cation binding domain-containing protein |
Protein accession | YP_003512549 |
Protein GI | 291301271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000606803 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGTCACCA CTGCCGAAAC CAATCTCGTC AACATCGTCG TATCCGATCA CCGGCTGCTG AACCGGGTCT TCACCGAGTT GCAGGACGAG AACCTCACCG GCGAGTGGCG GCGGGCGCTC ACCGACGCCC TGGTCGCCGA ACTGGTGGGG CACCTGCTGG CCGAGGAACA CTACCTGTAT CCGCTGGTGC GCTCCTATGT CAACAACGGC CGCGAACTGG CCGACCGGGA ACTGGCCGAA CACGCCGAAC TCAAACGGCT CATGAAGGAG CTGGAGGAGT TCGACGGCGC CGACCCGAGG TTCATCGCGC TGCTCGCCGA GCTGACCCGC CGGTGCCGTC GGCACATGGC CGACGAGGAG GACGTGACAC TGCCGCTGGT CGGGGCGGCG TGCAGCCCGC TGACCCTGCA GAAGCGGGGC GCGAAGATGC TGCGCAACAA GAAGTTCGCG CCCACCCGCC CGCACCCCGA CGCCCCGGAT CGTCCACCCG CCAACCTGAT CGTGGATCCG GGCGCCGCGT TCGTCGACCG GCTTCGGGAT CGCATCGACC CGACCGAGGT CTAG
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Protein sequence | MVTTAETNLV NIVVSDHRLL NRVFTELQDE NLTGEWRRAL TDALVAELVG HLLAEEHYLY PLVRSYVNNG RELADRELAE HAELKRLMKE LEEFDGADPR FIALLAELTR RCRRHMADEE DVTLPLVGAA CSPLTLQKRG AKMLRNKKFA PTRPHPDAPD RPPANLIVDP GAAFVDRLRD RIDPTEV
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