Gene Snas_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3797 
Symbol 
ID8884997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4050647 
End bp4051126 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003512546 
Protein GI291301268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.803773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000221567 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACGC GACCCCGCTG GCTGTCCGAC TCCGAGATGC GCGCCTGGCT CGGCTACCGC 
CGGATGCGCA ACCTGCTCGA CCCGCGCATC GACCGGGACC TGCAGACGAT GTCCGAACTG
TCGGAGCAGG ACTACGACGT CCTGTCGCAT CTGTCCTCGA TAGACGGACA TCGGGCCCGG
CTCACCGAAC TGAGCGCCCG GCTGCGGTGG TCGCGCAGCC GCCTGTCGCA TCACCTGGGC
CGGATGGAGA AACGCGACCT GGTGACCCGC GAGGTCGACC CCGCCGACGG CCGGGGCGCC
GTCGTCGCGC TGACGGACAC CGGCCGCACC GCCATCGAGA CCGCCGCGCC CGGCCACGTC
GCCTCGGTGC GGCGGCACTT CATCGACCTG CTCAGCCCCG AGCAGATCGA GGTGCTGGGC
GACATCGCCG AGACCGTGCT GTCGCGGCTG CGGACCGAGG ACCCGCCGCC GGGTGGGTAG
 
Protein sequence
MTTRPRWLSD SEMRAWLGYR RMRNLLDPRI DRDLQTMSEL SEQDYDVLSH LSSIDGHRAR 
LTELSARLRW SRSRLSHHLG RMEKRDLVTR EVDPADGRGA VVALTDTGRT AIETAAPGHV
ASVRRHFIDL LSPEQIEVLG DIAETVLSRL RTEDPPPGG