Gene Snas_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3787 
Symbol 
ID8884987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4043839 
End bp4044711 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content72% 
IMG OID 
ProductSiderophore-interacting protein 
Protein accessionYP_003512537 
Protein GI291301259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000271751 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGTGGT TGAAAGACCG GGAACGGCAT CGGGAGCTGA TCGCCGAGGT CAAGGCGGGC 
ACCGAACCCG CCCGGGTGCC GTACCCGATC CGGATCCGCG AGGCCGAGGT CCTGCGCACC
ACCCCCGTCG GCACCGGCCT GATCCGGGTC ACCCTGGGCG GCCCCGGCAC CGAGGGCTTC
GAAGCCCACG CCCCCGACGA GCACGTCAAA CTGTGCTACC CCGAACCCGA CGGCACCCTG
CGGCTGCCCG AACCCAACGG CCTGATGCTG GCCTGGCCCC GCCCCTCACC CACCACAAGG
GAATACACGG TGCGGCGCTT CGACGCGGCC ACCGGCGAAC TCGACATCGA CATCGCCGTC
CACGGCGACG GCCTGGGCGC GGACTGGGCC CGCACCGTCG CGCCCGGCGC CACCATCCAC
GTCGCGGGCC CGCCCGGCGG CGCCATCGTC CCGTTCCGCT ACGACCGGTA CCTGCTGGCC
GGGGACATCA CCGCGCTGCC CGCCATCGCC CGCTGGCTGG AGGAACTGCC GCGCGACGCC
AAGGGCTGGG CCTTCATCGA GGTCGCCGAC GCCGACGAAC AGATCCAGCT GTCGCCGCCC
GAGGCGGTCG CGGTCACCTG GCTGCATCGC GGCGAGGCAC CCGCCGGATC GCTCGACCTG
CTCGCCGAGG CCGTCACGGC GGTGACCGTC CCCGAGGGCG AACGCGTCCA CGTCTGGGCC
GCCGGGGAGG CCGGGTGCCT GAAACCGTTG CGGCGCTGGG TCCGGGACGA CCTGAAGCTC
GACAAGGCCG ACCACAACAT CACCGGCTAC TGGAAACGTG GCGTCGCCGA CTACGACGAG
GACGACCACA ACCACTCCCA CTCACACGAT TAA
 
Protein sequence
MRWLKDRERH RELIAEVKAG TEPARVPYPI RIREAEVLRT TPVGTGLIRV TLGGPGTEGF 
EAHAPDEHVK LCYPEPDGTL RLPEPNGLML AWPRPSPTTR EYTVRRFDAA TGELDIDIAV
HGDGLGADWA RTVAPGATIH VAGPPGGAIV PFRYDRYLLA GDITALPAIA RWLEELPRDA
KGWAFIEVAD ADEQIQLSPP EAVAVTWLHR GEAPAGSLDL LAEAVTAVTV PEGERVHVWA
AGEAGCLKPL RRWVRDDLKL DKADHNITGY WKRGVADYDE DDHNHSHSHD