Gene Snas_3750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3750 
Symbol 
ID8884949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3997635 
End bp3998339 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content74% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003512500 
Protein GI291301222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0965608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0970291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA ACAACCCGAA AATCGCACTC ATCACCGGAG CCTCCCGGGG TCTGGGCAAG 
GCGCTGGCCA CCGAACTGTC GCGACGCGGC TGGCGGCTGC TGCTGACCGC CCGCGGCGCC
GAGGACCTGG CGGCGGTCGC GTCCGAACTG GACGCCGAGG CCATCGCCGG TGACGTCGCC
GATCCCGGTC ACCGCGAGCG GCTGGCCGCC GCGATCGAGA GGCTGGGCGG CCTCGACCTG
CTGGTCAACA ACGCCTCCAG CCTGGGCACC TCACCGCTGC CCCGGCTGGC CGACTACTCG
CGCGAGGTCC TGACCGGACT GTTCGACACC AACGTCGTGG CCCCGCTGGC ACTGATCCAG
GACCTGCTGC CCCGGCTGCG GGAACGCGAC GGCGCCGTCG TCAACATCTC CTCCGACGCC
GCCACCGGCG GCTACGAGGG CTGGGGCGGC TACGGCGCCA CCAAGGCCGC CCTGGACCAG
GTGTCCAACG TGCTGGCCGC CGAGGAACCC GGGCTGCGGG TGTGGTGGGT CGACCCCGGC
GAGATGCGCA CCGCGATGCT GGCCGACGCG GTCGGCGACG AGGCCGCCGA CGCGCCGCCG
CCGGAGGCCG TGGCCGCACC CGCCATCGCC GGGCTGCTCG ACTCCCGACC GGCCAGCGGC
CGGTATGTGG CCGCCGAGCT GGGCGTGGAA GCGGGTGCGC GATGA
 
Protein sequence
MTNNNPKIAL ITGASRGLGK ALATELSRRG WRLLLTARGA EDLAAVASEL DAEAIAGDVA 
DPGHRERLAA AIERLGGLDL LVNNASSLGT SPLPRLADYS REVLTGLFDT NVVAPLALIQ
DLLPRLRERD GAVVNISSDA ATGGYEGWGG YGATKAALDQ VSNVLAAEEP GLRVWWVDPG
EMRTAMLADA VGDEAADAPP PEAVAAPAIA GLLDSRPASG RYVAAELGVE AGAR