Gene Snas_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3749 
Symbol 
ID8884948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3996545 
End bp3997450 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512499 
Protein GI291301221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0709366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.107675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACG GTGAGGATCT GTACACGGTC GAAGCGGACA CGCCGGACAT CAGCGGCGCG 
GTGATGCTGG TTGAGCTGCG GGGATTCATG GACGCCGGTC AGGCCGGGCA GGGCGTCACC
GAGTACCTGC TGAAGGAACT GGACCACCAG GTGGTGGCCA GCTTCGACGT TGACGAGCTG
ATCGACTACC GGGGCCGCCG TCCCGTCATG ACCTTTGACA CCGACCACTG GGTTGACTAT
GACGCGCCGC GGTTGCGGGT GTACCTGATG CGTGACGACG TCGGGGTGCC GTTCCTGTTG
CTCAGCGGCG ATGAGCCGGA CCTGCGCTGG GAGCGGTTCG CCGAGGCGGT GCAGTCCCTC
ATCGAGAAGT TCGGGATCCG GTTGACCGTC GCGTTGCACG GCATTCCGAT GGGGGCGCCG
CACACCCGTC CGCTGGGGGT GACCGCGCAC GGCACCGACG CGTCGCTGTT GCCGTCGGGG
GAGCGGACCT TGAACCGGTT GCAGGTGCCC GGCAACGCCG CGGCGTTGCT GGAGCTGCGA
CTGGGCCAGG CCGGGCACGA CGCGATCGGT TTCGCGGTGC ACGTGCCGCA CTATCTGGCG
CAGGCGTCCT ACCCGAACGC GTCGGTGCGG CTGCTGGAGT CGCTGCACCA GGCCACCGGC
CTGTCGGTCT CGGTGGAGTC GTTGCGCGAG GAGGGCCGGG TCGTCGACGC CGAGGTGGAC
TCGCAGGTGC GGGCCTCGCA GGAGGTGTCG GACGTGGTGG CCGCGCTGGA GCGGCAGTAC
GACATGTTCG ACGACTCGCG GCCGAGCCTG CTGGTCGAGG AGTCGGAGGA GGAGCTGCCC
ACCGGCGACG AGCTTGGCGA GCAGTTCGAG CGGTTCCTGG CCGAGCAGCA GCGCCGCTCC
GAGTAG
 
Protein sequence
MPNGEDLYTV EADTPDISGA VMLVELRGFM DAGQAGQGVT EYLLKELDHQ VVASFDVDEL 
IDYRGRRPVM TFDTDHWVDY DAPRLRVYLM RDDVGVPFLL LSGDEPDLRW ERFAEAVQSL
IEKFGIRLTV ALHGIPMGAP HTRPLGVTAH GTDASLLPSG ERTLNRLQVP GNAAALLELR
LGQAGHDAIG FAVHVPHYLA QASYPNASVR LLESLHQATG LSVSVESLRE EGRVVDAEVD
SQVRASQEVS DVVAALERQY DMFDDSRPSL LVEESEEELP TGDELGEQFE RFLAEQQRRS
E