Gene Snas_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3746 
Symbol 
ID8884945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3992911 
End bp3994032 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content73% 
IMG OID 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_003512496 
Protein GI291301218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.200726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.275416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACC GGGAGGACAC CGACGAGGTG CTCAGCGCCG TCAGCACCGC CGTGCTGTCG 
GTGACGCGGC ATCTGTCGGT GGCCGAGGTG CTGGAGGTGA TCGTGCGGTC CTCGCGGCAG
CTGCTGCGGG CCCGCTACGC CGCCCTGGGC ATCCCCGACG AGGGCGGCGG CTTCGCCGAG
TTCATCACCG ACGGCATCAG CGAGCGGCAG CGCGCCGCGA TCGGGCCGCT GCCGCGCCAG
CACGGGATGC TGGCGGCGCT GCTGCACGAG GGCGAGACCA TCCGCAGCCG CGACATCCGC
GCCGATGCCC GGTTCGGGTA CTTCCCGACC GCGCACCCCA ACATGACCGA CTTCCTGGGT
GTGCCGATCC GCGACGGCGA CGAGACCGTC GGCATCATCT TCCTGGCCGA CAAGGAATGC
GGCTTCACCG AACGCGACGA GGCGCTGCTG ACGCTGTTCG CCTCGCACGC GGCGATCGCG
TTGGCCAACG CCCGCCTGTA CGAGCAGGCC CACGAGCTGA GCGTGGTGCA GGAACGCACC
CGGCTGGCCC GGGAGTTGCA CGACGCGGTC TCGCAGAAGC TGTTCTCGCT GCGGCTGGCC
GCCTCCTCGG CGCGGGCGCT GGCCGCCAGC GACGCCGACG CGGCCCTGTC GCAGCTGGAG
AAGGTCGAGT CGCTGGCCGC CGAGGCCGCC CGGGAACTGC GCGAGGTGAT CGTGGAGCTG
CGTCCCGCGG ACCTGGACGT CCACGGTCTG GCCGGGACGG TGCGCAAGCA CCTGCGGCTG
GTGGAGCGGC TGCACGCGGT GCGCACCGAG TTCACGGTGC ACGGCGACCC CGGCGTGCCC
GCCGGGGCGG AACTGGAGGT GCTACGGGTG ATTCAGGAAG CGGTGCACAA CGCGGTGCGG
CATTCGCACG CCGACCTGGT GCGGGTGACC CTGTGCGGCG GGCCCGAGTT CCTCGCCGAG
ATCAGCGACG ACGGCTCCGG CTTCGACCCC GGGGCCGACA ACGGCGGCGG CCTGGGCATC
GAGTCGATGC GTGAACGCGT CGCCGGAGTC GGTGGCCGCC TGGACATCGA CGCGTCCATC
GGCGGCGGCA CCACGGTGCG GCTGGCGGTG CCCGGTGTCT GA
 
Protein sequence
MTDREDTDEV LSAVSTAVLS VTRHLSVAEV LEVIVRSSRQ LLRARYAALG IPDEGGGFAE 
FITDGISERQ RAAIGPLPRQ HGMLAALLHE GETIRSRDIR ADARFGYFPT AHPNMTDFLG
VPIRDGDETV GIIFLADKEC GFTERDEALL TLFASHAAIA LANARLYEQA HELSVVQERT
RLARELHDAV SQKLFSLRLA ASSARALAAS DADAALSQLE KVESLAAEAA RELREVIVEL
RPADLDVHGL AGTVRKHLRL VERLHAVRTE FTVHGDPGVP AGAELEVLRV IQEAVHNAVR
HSHADLVRVT LCGGPEFLAE ISDDGSGFDP GADNGGGLGI ESMRERVAGV GGRLDIDASI
GGGTTVRLAV PGV