Gene Snas_3732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3732 
Symbol 
ID8884931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3976570 
End bp3977841 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content70% 
IMG OID 
Productheat shock protein DnaJ domain-containing protein 
Protein accessionYP_003512482 
Protein GI291301204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.143539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0525791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAC CTGATTACTA CAGAATTCTC GGACTGACGA CCTCAGCCGA GATCGCAGAG 
ATCCGGCAGG CCTACCGCCG GAAAGTTCGT GACGCCCATC CCGACGCCGG TGGCGATCCC
GAGGTCTTCC ACGAACTGCA GGAAGCCTAC GAGACGCTCA CCGATCCGGT CCTGCGTCTC
GAGTACGACG CCGCCCGCGG TACCCGCAAG CCCCCGTGGG GGAATCGCCG CCGTCCCGGC
CGCCACACCA AGAGCCACAA GGTCAAGGCC TGGCGCGTCA ACACCACCGT CGACAAACCG
GCCAACAAGA ACGCCGCCCC CACCACCCCG CCGGGCGCCG GGGAGGTCAT GTCGCTGCCG
TGGTTCGTCG ACATCGACCC GACCAAGCGA CTGCGCTACA CGCCCTCGGT GTGGCAGCGC
GGCGGCATCG CCGCCGGTAT CGGCGCCGCC TGGACGTATC TGACGATCCA GGTGTCGGCC
CTGGTGCTGG CCAGCGACAC CATCACCGTC CTCAAAGCTC TCATCGTGCC CTACATGCTG
CTGGTCGCCG GAGTCGTGGC CGTGGCCTGT TTCCGCGGTC TGCGTCCCAC CCGGCCCACC
TCGTTCATCG TCACCGGTGT GGTGGCGCTG GTGGTGGTGT GGCTGTCGGG CGCCACCCTG
GGCGGGATCC TGCTGGCGCT GCACCTGGTG GCCTCGGCGG TACTGCCGTG GTCGGTGCGG
CGGGTCCGCA TCGCCGCGCG GCTGCGCGCC GCGGTGCGCA GCGCCCTGAA GGACTTCAAC
GCGTTCGCGC CCTCGGGCGC CAAGCCCAGT GCCGACCGAC GTACCGGCGC CGTGTTGCGC
ACACTGTTGG AGCGGCTGCC CGCCGCCCGG TTGTTCGTGC GGGTCCCGGT GGGTGTGCAC
CGCGCCGAAT ACACTGTTGT GTGTGGACGC CGGGTCGCGG TGATCGCGCC GCCGGTGCCC
CGTTCCACCG GCGACTCCGG TGCCGAGGCG CTGCCCAGCG CCGTCCACGA CGTGTCGCAG
TTGCTCAACG AGGCCACCGT GCGCGGTTTC GTCGTGTGGC CGAACCTGCC GGTGGATCGC
ATCTCCGGTG CCGACGCGGT GATCCGGCAT CTGTCGGCTC CCGACGCGGC CGGTGAGATC
GGGCGTTGGC TGGCCAACGA CCCGTACACG CTGCACCTGC CGACCTTGCG TCGGCTGCGG
GACCGGCTGG CAGCGGCCGA CGGTGCCGAG TCGGCCCGCA AGGCCCCGCC CCGCAGCACC
ATCGAGGTCT GA
 
Protein sequence
MTEPDYYRIL GLTTSAEIAE IRQAYRRKVR DAHPDAGGDP EVFHELQEAY ETLTDPVLRL 
EYDAARGTRK PPWGNRRRPG RHTKSHKVKA WRVNTTVDKP ANKNAAPTTP PGAGEVMSLP
WFVDIDPTKR LRYTPSVWQR GGIAAGIGAA WTYLTIQVSA LVLASDTITV LKALIVPYML
LVAGVVAVAC FRGLRPTRPT SFIVTGVVAL VVVWLSGATL GGILLALHLV ASAVLPWSVR
RVRIAARLRA AVRSALKDFN AFAPSGAKPS ADRRTGAVLR TLLERLPAAR LFVRVPVGVH
RAEYTVVCGR RVAVIAPPVP RSTGDSGAEA LPSAVHDVSQ LLNEATVRGF VVWPNLPVDR
ISGADAVIRH LSAPDAAGEI GRWLANDPYT LHLPTLRRLR DRLAAADGAE SARKAPPRST
IEV