Gene Snas_3720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3720 
Symbol 
ID8884919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3963444 
End bp3964448 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content69% 
IMG OID 
Productcytochrome d ubiquinol oxidase subunit II 
Protein accessionYP_003512470 
Protein GI291301192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.394362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.077085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGC CGACCGTGTG GTTCGTACTC ATCGCCGTAC TGTGGACCGG CTACTTCGTC 
CTGGAGGGAT TCGACTTCGG CGTCGGCACC CTCATGGGCG TCATCGGCCG CGACAACCCC
ACCCGCGCCA CCATGATGGG CACCATCGGA CCGGTGTGGG ACGGCAACGA AGTCTGGCTG
ATCGTGGCCG GAGGCGCCAC CTTCGCCGCC TTCCCCGCCT GGTACGCCAC CCTGTTCTCC
GGCTTCTACC TGCCGCTTCT GGTCATCCTC ATCGCCCTGA TCGTGCGCGC CGTGGGCATC
GAATACCGCC ACAAGCGCGA CGACATCGCC TGGCAGCGCC GCTGGGACGC CTGCATCATC
GCCGGATCGA TACTGCCGTC GTTCCTGTGG GGCGTCGCCT TCGCCAACCT CACCGCCGGA
GTCCCCATCA ACGCCGACGG CAACTACGCC GGAACCGTGT TCGACCTGCT GGGCGGCTAC
GCGCTACTGG GCGGCCTGAC CACGCTGGCC CTGTTCACCA CCCACGGCGC GGTGTTCCTG
GCGCTGAAGA CCACCGACCC GCTGCGCACC ACCGCCCGCC GCACCGCCGT ACGCCTGGGC
GTGGTGACCA TCGTCGCCGC GGCGGCCTTC CTGACCTGGA CGGCGTTCAA ACACGCCAAC
CCCGCCTCCA TCGCCCTGTC GATCACCGCC GCCGTGGCCC TGGTCGCCGC CGTGGCGCTC
GTGGCCGCCG GACGCGAGGG CTGGTCGTTT TCGGCCACCA CCGTCACCAT CACCGCCGTG
GTCGCGGCGC TGTTCACCGC GCTGTTCCCC GACGTCATGC CGTCCACGAT CGACTCCGCC
TACAGCCTCA CCGTCGCCGG AACCGCCTCC TCGCCCTACA CGCTGAAGAT CATGACGATC
GTGGCGGCGA TCTTCACCCC GGTGGTGCTG CTGTACCAGG GCTGGACCTA CTGGGTGTTC
CGCAAACGCC TCACCGCGCC CCGGCAGGCC GACGCGCACA CCTGA
 
Protein sequence
MDLPTVWFVL IAVLWTGYFV LEGFDFGVGT LMGVIGRDNP TRATMMGTIG PVWDGNEVWL 
IVAGGATFAA FPAWYATLFS GFYLPLLVIL IALIVRAVGI EYRHKRDDIA WQRRWDACII
AGSILPSFLW GVAFANLTAG VPINADGNYA GTVFDLLGGY ALLGGLTTLA LFTTHGAVFL
ALKTTDPLRT TARRTAVRLG VVTIVAAAAF LTWTAFKHAN PASIALSITA AVALVAAVAL
VAAGREGWSF SATTVTITAV VAALFTALFP DVMPSTIDSA YSLTVAGTAS SPYTLKIMTI
VAAIFTPVVL LYQGWTYWVF RKRLTAPRQA DAHT