Gene Snas_3719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3719 
Symbol 
ID8884918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3962386 
End bp3963267 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content71% 
IMG OID 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003512469 
Protein GI291301191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0910486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0426216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGGA GGCGTCGAGT CGTCGGAATC GGCTGTGTCG GAGCCGTACT CGTAACCGGT 
AGCGCGACCG CCACCGTCTC CACCCAGGCC TACACGCCGC CGAAGTCCTG CCTGGAGAGC
GTGACCGTCT TCGCCGACGG CGGCAAGACC GCCACCGCCC CCGACATGAC CGCCGCGGCC
ATGAGCCAGG CCGTCGCCCG CAAGGGCACC TGGCTGTCGG CCGACGTGCG GCTCACCGCC
GACGGCGTCC CGGTCCTGGT GCGCGACGCC AACCTGCGCC GCACCACCAA CGTCGCCGAG
GTCTTCCCCA AGCGTGCCGA CGACAACGTC GACACCTTCA CCCTCGCCGA ACTCGAACGC
CTCGACGCGG GCACCTGGTT CGGCGACGGC TACCGGGGCC AGAAGCTGCT GACGATGCGC
GACCTGCTCG ACTACGCCTC CGTCGAGTCC GGCATCGGCC TGTCACTGGC GCCGCGCGAC
CTGGCCACCA CGCCCGGCCT GGCCGAGGCC GTCGACAACG AGTTCCGCGC CGACGAGCGC
TGGGAGGAAC TGTTCGACGC CCGCCTGGTC CAGCTGCGCT CCAGCGAGGC CGAGGCCATG
AGCGACCTGG CCCGCTGGGT CCCCGAGGCC AGCATCCAGT GGGAGACGGC CAGCGTCCCC
GGTGAAGAGG AACTGGCCGA GGCCCAGACC TGGGCCGACT CCATCGGCGT CGACTTCAAC
GAGGTCGGCG GCGAGGACGC CGAGCGCATC CACGACGCCG GACTGCGACT GGCCTGGCAC
GCCGTCGACT CGCCCACCGC GATGGCCGAC GCCATCAACG GCGGCGCCGA CGAGGTGTTC
ACCGTGGATC CCACCATCGC CGACGCCGTC TGCAAGGACT GA
 
Protein sequence
MSWRRRVVGI GCVGAVLVTG SATATVSTQA YTPPKSCLES VTVFADGGKT ATAPDMTAAA 
MSQAVARKGT WLSADVRLTA DGVPVLVRDA NLRRTTNVAE VFPKRADDNV DTFTLAELER
LDAGTWFGDG YRGQKLLTMR DLLDYASVES GIGLSLAPRD LATTPGLAEA VDNEFRADER
WEELFDARLV QLRSSEAEAM SDLARWVPEA SIQWETASVP GEEELAEAQT WADSIGVDFN
EVGGEDAERI HDAGLRLAWH AVDSPTAMAD AINGGADEVF TVDPTIADAV CKD