Gene Snas_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3718 
Symbol 
ID8884917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3961600 
End bp3962382 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512468 
Protein GI291301190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0734193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0692801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGAG AACTGACGAA CAAGATTACA GCACTGTGGA CGAACGGTCG GGTTGTCGAA 
CGGATCGGTT ACGTCGTCGC GATTCTGGCG TTCACCAGCG GGCTGTTCCA CCTCATCGTG
TACGCCATCG ACGGCGGCCC CTGGACCGGA CCGGTGTCGT GGCGCAAACC GGTCACCTTC
GGACTGTCCT TTGGCATCGT GCTGGCGACC ATCGTGTGGG TGTCGACGTA CATCTCCATC
GGGCCGAAGT TGCGCACCGT GTTGGTCGGG GCGTTCACCG CCGCCAGCGC CATCGAGGTC
GTGGGCATCA CGACCCAGCA GTGGCGCGGC CTGCCCTCGC ACTTCAACGA CGAGGACGCG
CTGTCGGCCC TCATCGGGCG GGTGGGCCTG GCCGGTGGCG GCGCGGTCCT CATCGCGATC
GTGCTGGCGT TGACGGTGTT GAGCCTGCGT CCGGCGCCGC AGACACCGCC CAGCATGCGG
CTGGCGGTGC GGGCCGGACT GTTGATCCTG GTGGGCGCCA TGGCTTCGGG GGCGGTCATG
ATCGCCACCG GCGCGACCCT GTCGGCCACC GAGAGTCACG AGCTGGCCTA CCGGGTGTCC
GGATGGCTGA AGCCCACGCA CGCGGTCACC ATGCACGCGG TGACGGTGCT GCCCGCGCTG
GCGCTGTTGG CCTCGTGCCT CAAGCGCGAC GAGGCCTGGC GGCTGCGACT GGTGAAGCTG
GCGGTGGCGG CCTACGGCGC GGCCGTGGTG ATCACGGTCG CGGTGAACGT GGCCCTGGGA
TAG
 
Protein sequence
MIRELTNKIT ALWTNGRVVE RIGYVVAILA FTSGLFHLIV YAIDGGPWTG PVSWRKPVTF 
GLSFGIVLAT IVWVSTYISI GPKLRTVLVG AFTAASAIEV VGITTQQWRG LPSHFNDEDA
LSALIGRVGL AGGGAVLIAI VLALTVLSLR PAPQTPPSMR LAVRAGLLIL VGAMASGAVM
IATGATLSAT ESHELAYRVS GWLKPTHAVT MHAVTVLPAL ALLASCLKRD EAWRLRLVKL
AVAAYGAAVV ITVAVNVALG