Gene Snas_3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3716 
Symbol 
ID8884915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3959739 
End bp3960521 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512466 
Protein GI291301188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.103811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGG GATCCACATT GATCGCGGGC TCGGCGATGG CCGACCCCGA CACATCGAGC 
GGCAAGACCC GCAGGCCGCG GCCGACCATC GTGCTGGTGC ACGGCGCGTT CACCGACGCC
AGCAGCTGGC ACGGGGTCAT CGGCCGTCTC CAGGACGCCG GGTACACGGT CATCGCCCCG
GCCAATCCGT TGCGGGACCT CACATCCGAC TCCGCCTACA TCGCCGCCGT CGTCAAGAGC
GTGAAGGGGC CGGTCGTGCT GGCCGGTCAC TCCTACGGCG GCGCGGTGAT CACCAACGCG
GCCCGCGAGG CCGACAACGT CACCGGCCTG GTCTACCTCG CCGCGTTCGC GCCGGACGAG
GGTGAGAGCC CCGGCAGCAT CAGCGCCGAC TATCCCGAGA CGCCGATCGG GCAGAGCCTG
GCGCCGCTGC CGTTGCCGGA CGGCACCGCG GACCTGCTCA TCGCGCCGGA CAAGTTCCAC
CACGTCTTCG CCCAGGACAT TCCGGCGGCC GACGCGGCCC GGCTGGCCAG CGCGCAGCGG
CCCATCGCCG AGGCCGCGTT CGGCGGCAAG ACCGGCGAAC CGGCGTGGAA GTCGCTGCCC
AGCTGGTTCC TCGTGGCCAC CGAGGACCAC GCCATCCACC CCGACGCGCA GCGCGACATG
GCCGAACGCG CGCACGCGAA GAAGACCGTC AAGGTCGCTT CGGGGCACGC GGTGTCGCTC
AGCCATCCCG GCAAGGTCGC GGCCCTGATC CGTACCGCGG CGAAGCAGGC CCGCGATTCC
TAG
 
Protein sequence
MAAGSTLIAG SAMADPDTSS GKTRRPRPTI VLVHGAFTDA SSWHGVIGRL QDAGYTVIAP 
ANPLRDLTSD SAYIAAVVKS VKGPVVLAGH SYGGAVITNA AREADNVTGL VYLAAFAPDE
GESPGSISAD YPETPIGQSL APLPLPDGTA DLLIAPDKFH HVFAQDIPAA DAARLASAQR
PIAEAAFGGK TGEPAWKSLP SWFLVATEDH AIHPDAQRDM AERAHAKKTV KVASGHAVSL
SHPGKVAALI RTAAKQARDS