Gene Snas_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3704 
Symbol 
ID8884903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3942185 
End bp3944221 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content69% 
IMG OID 
Productrhamnulose-1-phosphate aldolase/alcohol dehydrogenase 
Protein accessionYP_003512454 
Protein GI291301176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.701668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACG AGGCCGTGGA GCGGCTGCTG GAGCGCAGCA ACCGGCTTGG CAGCGACCCG 
CGCAACACCA ACTACGCCGG GGGCAACACC TCCGCCAAGG GCAGCGGCAG TGACCCGGTG
ACCGGTCGCG ACGTCGACCT GTTGTGGGTC AAGGGTTCCG GCGGTGACCT CGGGACGCTC
ACCGAGGCGG GGCTGGCGGT GTTGCGGCTC GACCGGCTGC GGGAGATGAC CAATGTGTAT
CCCGGTCCGG AGCGCGAGGA CGAGATGGTG GCCGCGTTCG ACTACACGCT GCACGGCAGG
GGCGGGGCGG CTCCGTCCAT CGACACGGCG ATGCACGCGC TGGTGGACGC GGCGCACGTC
GACCATCTTC ACCCCGATTC GGGTATCGCC ATCGCCACGG CCGCCGACGG GCCCGAGCTG
ACCGAGCGGA TCTTCGGCGA CAAGGTGGTG TGGGTGCCGT GGCGCAGGCC GGGATTCCAA
CTGGGCCTGG ACATCGCCGA CATCAAGGAA CGGCACCCGG AGGCGATCGG GACCATTCTG
GGCGGTCACG GGATCACCGC CTGGGGTGCG ACGAGCCAGG AGTGCGAAGA GAACTCACTG
TGGATCATCA ACACGGCCGC CGAGTACATC GCCACCCACG GCCGGGCCGA GCCCTTCGGT
GCGGTGCTGC CGGGTTACGA GCCACTGCCG GAGGAGTCTC GACGGGCCAG GGCGGCGGCG
CTGGCGCCGT TGCTACGGAA ACTCGTGTCC ACCGACGTGC GGCAGGTCGG GCACTTCAGC
GACGACGAGG CCGTGCTCGA TTTCCTGTCC CGCGCCGAGC ATCCCCGGCT GGCCGCGCTG
GGAACCAGCT GTCCCGACCA CTTCCTGCGC ACCAAGGTCC GTCCCCTGGT GCTGGACCTG
CCCGCCACCG CCGAACTCTC AGAAATACGG CAGCGACTGT CCGAACTGCA CGAACAGTAC
CGGGCGGACT ACCGGGATTA CTACCAGCGG CACGCTTCGC CCGACTCACC GGCGATGCGC
GGCGCCGACC CGCTCATAGT CCTGGTGCCG GGAATCGGGA TGTTCAGTTA CGGCAAGGAC
GCCCAGACCG CGCGGGTGGC CGGGGAGTTC TATCTCAACG CCGTCAACGT GATGCGCGGC
GCCGAGGCGC TGTCGCGATA CCAGCCCATC GACGAGAGCG AGAAGTTCCG GATCGAGTAC
TGGGCCCTGG AGGAGGCGAA ACTGCGCAGG CTTCCCAAGC CCCGGTCGCA CGCCGGACGC
GTCGCCCTGG TCACCGGGGC CGCCTCGGGG ATCGGCAAGG CAATCGCCAC GCGGCTGGCC
GCGCAGGGCG CCTGCGTCGT GGTGGCTGAT CTCGACCTGT CGAAGGCGCG CGAAGCCGCC
GCCGAGATCG GTTCGGCCGA CGTGGCCGTC GGCGTCGCGA TGGACGTCAG CGATGCCGAA
CAGGTGCGGG CGGCAGTCGA CGCCGCGCTG TTGGCGTTCG GCGGACTCGA CCTTGTCGTC
AACAACGCGG GACTGTCCAT TTCGAAGCCG CTGCTGGAGA CGACCGAAAA GGACTGGGAC
CTTCAGCACG ACGTGATGGC CAAGGGTTCG TTCCTGGTGT CGCAGGCGGC GGCCAAGGTT
CTCGTGGAAC AGGGACTGGG CGGCGACATC GTCTACATCT GTTCGAAGAA CTCCATCGTC
GCCGGGCCGA ACAACATCGC GTACTCGGCG ACCAAGGCCG ATCAGGCGCA CCAGGTGCGG
CTGCTCGCCG CCGAACTGGG GCCGCACGGG ATCCGGGTCA ACGGCGTCAA CCCCGACGGG
GTGGTGCGCG GTTCGGGCAT CTTCGCCAGC GGTTGGGGCG CACAGCGCGC GGCCGTGTAC
GGAGTGCCGG AGGAGGAACT GGGTGCCTTC TACGCCAAAC GAACCCTGTT GCAGCGCGAG
GTCCTGCCCG AGCACGTGGC CAGCGCGGTG GCGGTGCTCA CCGATGCCGA CCTCAGCCAC
ACCACCGGCA CCCATATTCC GGTCGACGCC GGGGTCGTGG CGGCGTTTCC ACGGTGA
 
Protein sequence
MTHEAVERLL ERSNRLGSDP RNTNYAGGNT SAKGSGSDPV TGRDVDLLWV KGSGGDLGTL 
TEAGLAVLRL DRLREMTNVY PGPEREDEMV AAFDYTLHGR GGAAPSIDTA MHALVDAAHV
DHLHPDSGIA IATAADGPEL TERIFGDKVV WVPWRRPGFQ LGLDIADIKE RHPEAIGTIL
GGHGITAWGA TSQECEENSL WIINTAAEYI ATHGRAEPFG AVLPGYEPLP EESRRARAAA
LAPLLRKLVS TDVRQVGHFS DDEAVLDFLS RAEHPRLAAL GTSCPDHFLR TKVRPLVLDL
PATAELSEIR QRLSELHEQY RADYRDYYQR HASPDSPAMR GADPLIVLVP GIGMFSYGKD
AQTARVAGEF YLNAVNVMRG AEALSRYQPI DESEKFRIEY WALEEAKLRR LPKPRSHAGR
VALVTGAASG IGKAIATRLA AQGACVVVAD LDLSKAREAA AEIGSADVAV GVAMDVSDAE
QVRAAVDAAL LAFGGLDLVV NNAGLSISKP LLETTEKDWD LQHDVMAKGS FLVSQAAAKV
LVEQGLGGDI VYICSKNSIV AGPNNIAYSA TKADQAHQVR LLAAELGPHG IRVNGVNPDG
VVRGSGIFAS GWGAQRAAVY GVPEEELGAF YAKRTLLQRE VLPEHVASAV AVLTDADLSH
TTGTHIPVDA GVVAAFPR