Gene Snas_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3700 
Symbol 
ID8884899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3937834 
End bp3938853 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content70% 
IMG OID 
Productinner-membrane translocator 
Protein accessionYP_003512450 
Protein GI291301172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.299655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGGCG TGTCGACGCT GCTGCGGCGG CGCGAGTTCG GTGTCGTCGT GGCGATCGGG 
GTCCTGATCG CCGTGACCAC GGTGATCAGT CCCAGTTTCG CCACCGGTAC CGACGGATTC
CGCAACCTGC TGTTGACGCC GTCACTGTTG ATGATCCTGG CCGTGGCGCA AGGGATCGTC
ATCATCACCA AGAACATCGA CCTGTCGGTC AGCGCGGTGC TCGGACTGAC CGCATACGCC
ACCGGCCGCA TGTTCGTCGA CCTGCCAGGC CTGCCGATCC CGGTGGTCAT CCTGCTCGGC
GTCGGCCTGG GAACGCTGTT GGGTGCCGTG AACGGAACGC TGGTGAGCCT CGGCAGGGTT
CCCTCGCTGG TGATCACACT GGGGACGCTG TACGCGTTCC GGGGCATCGA CATCGCCTGG
GCGGGCGGGG ATCGCGTCAA CGCCGGGGAA CTGCCCCGGG AGTTCACCAC CATGGGAACC
CAGACGGTGC TGGGCGTGCC GGTGCTGTTC GTCGTCGCCG TCGCGGTACT GGCGGTCGTC
GCCTACGTCC TGGGCCAGAC CCGTTCGGGC CGGGAGCTGT ACGCGATCGG TTCCGACGAC
GCGGCGGCGG TGCTGTACGG GCTGCGGGTG CGACGACGGG TGTTCTTCGG GTTCCTGGCC
TCGGGGACGC TGGCCGGACT GGCCGGGGTC CTGTTCGCCG CCCGCTACGC CTCGGTCAGC
TCGAACGCCG GTACCGGAAT GGAACTGGAG GCGGTGGCCG CCGCCGTCCT GGGTGGAGTG
GCCATTGTGG GCGGCACGGG TACGGTGCTG GGCGCCGTGC TGGGCGCGGT CCTGCTGACC
ACGATCAGCC GGGCGCTGCC GACTCTGGGG ATCGGCGAGT TCTGGCAGCA GGCGGTGCTG
GGCGCGCTCA TCATCGGCGC GATCCTGCTG GACCGGGTGA TCGCCGCCCG CCAGGCCCGA
CGGCTGCGAT CCTCGCACGC GTCGATCGCC GTCGCCCCGG CGAAGGAGGC GGTGACATGA
 
Protein sequence
MSGVSTLLRR REFGVVVAIG VLIAVTTVIS PSFATGTDGF RNLLLTPSLL MILAVAQGIV 
IITKNIDLSV SAVLGLTAYA TGRMFVDLPG LPIPVVILLG VGLGTLLGAV NGTLVSLGRV
PSLVITLGTL YAFRGIDIAW AGGDRVNAGE LPREFTTMGT QTVLGVPVLF VVAVAVLAVV
AYVLGQTRSG RELYAIGSDD AAAVLYGLRV RRRVFFGFLA SGTLAGLAGV LFAARYASVS
SNAGTGMELE AVAAAVLGGV AIVGGTGTVL GAVLGAVLLT TISRALPTLG IGEFWQQAVL
GALIIGAILL DRVIAARQAR RLRSSHASIA VAPAKEAVT