Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3696 |
Symbol | |
ID | 8884895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3932595 |
End bp | 3934235 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003512446 |
Protein GI | 291301168 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.772784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.201816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCTGA CCAGCCTCCC CGACTGGTTG TCGTCGATCT CGTCGGCGGC CGCCCTGCTG TTCGCCGCGA TCGCCGCCGT GGCCGCCAGA AACGTGTACA AGATCGAGTC CGCCCGCGAC CAGGCCAACG CCGCACTGCG CGCGAAACAG GACGCGCTGG AGCGGCGCGA CCAGGCGGCA CTGGTGTCGG CGTGGTGGGG CTACTCGCCC GACGGCGGCC AACAGTCACA ACCGGGCTGG GGCGTGTTCG TCCGCAACGC CTCCGAGACA CCGGTGTACA ACGCCGGATT CTCGGTGCTC GACGTCCGCG ATCCCAACGT CAGCGAACGG TTCGACATGG TGGTGATACC CCCGGCGGCG GAACCGGTGT TCCACCCGAG TCCGTTGAGC GCCTCCAAAC CCGCCGACTT CCGTGTCGAG GTGACCTTCA CCGACTCGCG GGGACAGCGA TGGATCCGCG ACAAACAGGG CCGCCTCCAC GAACTCGGAC CGGCGGTCGT GGTGTGGGGG GACGAGTCGC GCATCAACGC CCTGCGACGG TTCTTCTCGG ACTTCCTCGC CTCCCACGGC GTCGAGATCC ACGCCCGCAC CGGCGACATC GAAGACCTCC GCCGCGCACT GCTCGACGCC GACGACGCCA CCGCGGCACC CGACATCGTC GTCGGACCGC ACGACTGGAT CGGCGGCCTG GTCGAACAGC AACTCATCGA ACCGCTGACG CTGTCGCCAC AACACCGCGC GGCCTTCGAC GCGCTGTCCC TGGAAGCGAT GACCTACCAC GGCGAGCTGT ACGGCATCCC CTACGCGTTC GACGCCCCGG TACTGCTGCG CAACACCGAT CTCGTAGCCG AAGCCCCATC GTCCTTCGAG GACATGCTCC ACAAGGGCGA AGCGGTCCGC CGCACCGGAA CCACCGAACT GCCGTTCGTG ATGCAGGTCC CCAGCCCCTA CTACACCTAT GCCGTGCTGC TGGCCGCCGG CGGCGCGGTC TTCGGCCGAC GCGCGGACGG TGGCCTGGAC ACCGGCAAAC TGGAGATCCT TTCCACCGCA ACCCGAGTCG CCCTCGACCG CTTCCGCGAC CTGGGGCAGG CCGGACACCA GCACCTGCCC CCGAGGATCG GTCGCGAGGA GGCCATCGAC CTGTTCGTCA GTGGACGGAC GCCATTCCTC ATCGGCACCT CGCGCGTACT GCTCGCCGCC CAGAAAGCCA GACTGAACCT CGCGGTCGAC CCGGTCCCGT CATTCGACGG CGTCGACCCG GTGCGCCCCA TGGTCTCCGT ACACGGTTTC TTCCTCACCC GATGCGGCCA CAACAAGGTC ATCGCGCGAG ACCTCATCGT CGACCACCTC ACCCGCACCG AAGTCTCCAC CGCCCTGCAC GAGGTCTGGC CCCACGTCCC GGCCCGACGC GACGCACTGG AACGCGGTCG CGACATCGAC CCGGCGATCG GCGCGTTCTA CGAGGCGTTC CGCGCCGGAG ACCCGATGCC GTCGATACCC CAGATGGGCG ACGTGTGGCA GTCCCTGCGC AGCGCCGTGA TCAAACTGGT CGACGGGGCC GAGGCCGGGC CGGTCGCGCG CCAACTGTCC AAACAGCTCG AAGACCTGTT GAACGGCAAA CACAACCGGG GGACACGATG A
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Protein sequence | MNLTSLPDWL SSISSAAALL FAAIAAVAAR NVYKIESARD QANAALRAKQ DALERRDQAA LVSAWWGYSP DGGQQSQPGW GVFVRNASET PVYNAGFSVL DVRDPNVSER FDMVVIPPAA EPVFHPSPLS ASKPADFRVE VTFTDSRGQR WIRDKQGRLH ELGPAVVVWG DESRINALRR FFSDFLASHG VEIHARTGDI EDLRRALLDA DDATAAPDIV VGPHDWIGGL VEQQLIEPLT LSPQHRAAFD ALSLEAMTYH GELYGIPYAF DAPVLLRNTD LVAEAPSSFE DMLHKGEAVR RTGTTELPFV MQVPSPYYTY AVLLAAGGAV FGRRADGGLD TGKLEILSTA TRVALDRFRD LGQAGHQHLP PRIGREEAID LFVSGRTPFL IGTSRVLLAA QKARLNLAVD PVPSFDGVDP VRPMVSVHGF FLTRCGHNKV IARDLIVDHL TRTEVSTALH EVWPHVPARR DALERGRDID PAIGAFYEAF RAGDPMPSIP QMGDVWQSLR SAVIKLVDGA EAGPVARQLS KQLEDLLNGK HNRGTR
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