Gene Snas_3693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3693 
Symbol 
ID8884892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3929782 
End bp3930261 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content64% 
IMG OID 
ProductRicin B lectin 
Protein accessionYP_003512443 
Protein GI291301165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.257313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.321314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAGAC TCAAAGCCGC CCTTGTCGTC GCGCTCGCGA CGGCGCTGGG CTTGATCGGC 
GCGGTGTCTG TCAGCGGTTC GGCTCAGGCG GCTACCAGGT CACCGATGGT CATCAAGAAC
ATGCAGACCG ACCGGTGCCT GTCCAGCAAT TCCGCTGGAA CCGTCCACTC GAACCCGTGC
AGCGGAAGCG ACAACCAGAT CTGGGATCGC ACCCTCGACG GCGACAGCAA CTCCACGCTG
AGGAACCGGG CCACCGGCCG GTACCTGCAA GCCCATGCGA ACGAAACGGT GACCACCCAA
CCCCGCAGCG GGAGCGCCGC GCAGAAGTGG CGCATCAGCC ACAGCCCGCA CGAGGGTTAC
TGGCGGATCA AGAACCTGGG CAACGGCAAG TGCCTGTCGA ACTACGGGTC TTCCGACCCT
CGGACCACTC GCACACTTAC CTGCGGCCCC AGCACTTTCG ACGCTTGGAA GATCAACTGA
 
Protein sequence
MPRLKAALVV ALATALGLIG AVSVSGSAQA ATRSPMVIKN MQTDRCLSSN SAGTVHSNPC 
SGSDNQIWDR TLDGDSNSTL RNRATGRYLQ AHANETVTTQ PRSGSAAQKW RISHSPHEGY
WRIKNLGNGK CLSNYGSSDP RTTRTLTCGP STFDAWKIN