Gene Snas_3685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3685 
Symbol 
ID8884884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3918958 
End bp3919719 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content68% 
IMG OID 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_003512435 
Protein GI291301157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.265853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.255424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCTT TCGGCGTCCC CGATGGACTG GTTTGCCACG TTCTTCTCCT CGAGACGGAC 
ACGGGCCTCG CACTCGTCGA CTGTGGATTC GGCACCCTCG ACATCGCCAG CCCCGCCAAA
CGCTGCGGCC CGATCAGGCA CTTCATCCGG CCTGCCTTCG ACGAAGCCGA GACCGCGATC
CGGCAGGTCG AGCGGCTTGG CCACCGCCCC AGCGATGTCC GCGACATCGT GGTGACCCAC
TTCGATGCCG ATCATGTCGG TGGCCTGTCC GACTTTCCAT GGGCCCGAGT CCATGTCACC
GCCGATGAAG CGGCCGGTGC TCTGCGTCCC GTTACCCTGC TGGAGAAGCG GCGCTACCGA
AGCGCTCAGC GCGATCACGG TCCCGAGCTC GTCCCGCACA CCCCGGGTGA GAAAGAGTCC
TGGCGCGGGT TCACCGGAGT CAAGGAACTG ACCGAGATCG CCCCGGGCAT CGTGCTGATC
AGCCTGCCGG GGCACACCCG TGGCCACGCC GCTGTCGCCG TCGACGCGGG AGACCACTGG
GTCCTGCACG TCGGCGATTC CTTCTATCAC CGCTCGCAGT TGGGTAGCGC GAAGCGACCG
CCGGTTTCAC TGCGGGTCCT GGAGCGCGCC GTCGCCTTCG ACCGGGACCG GCTCGGGGCG
AATCTCGCAC GGCTGACCGA GCTGTGGAAC GACTCGGAGC CGGGCCTCGT TCTCGTCAAC
GCGCACGACC CCACGTTGTT GCACCGAGCC CGGTCCCGGT GA
 
Protein sequence
MSPFGVPDGL VCHVLLLETD TGLALVDCGF GTLDIASPAK RCGPIRHFIR PAFDEAETAI 
RQVERLGHRP SDVRDIVVTH FDADHVGGLS DFPWARVHVT ADEAAGALRP VTLLEKRRYR
SAQRDHGPEL VPHTPGEKES WRGFTGVKEL TEIAPGIVLI SLPGHTRGHA AVAVDAGDHW
VLHVGDSFYH RSQLGSAKRP PVSLRVLERA VAFDRDRLGA NLARLTELWN DSEPGLVLVN
AHDPTLLHRA RSR