Gene Snas_3677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3677 
Symbol 
ID8884876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3908580 
End bp3909806 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content72% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003512427 
Protein GI291301149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.10393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0950882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGGT CCAACCTCCA GCAGGTGTTC GGTGTGCGGT ATGCACCGGT GCGCATGCTG 
GCCATGGCGG CGTTGTCGGC CGGATACCTC GGCTTGCGGG CCGACGGCGT CACGACCGCC
GACTGGCTGT TCGCGGCGGC GGCGGTGGTG CTCGGCGGTC TCGCCAGCGC CGTCCCGCTG
GCGGCGGCGA TCGCGTTGGC GGCGTTGCTG GCGGTCGCGG CCACCGTCGG CGGCGATGGT
CCGGCGGTGA TGCTCGTGAA GATCTTCGCC AGTTTCGCGC TGTTCGAACT GGCCGCCCGC
CGCCCGGCCC GGTGGGCCGG GATCGCCGCG GTGGCACTGG TCGTGGGCTC GCTGGCGGGC
AAGGTCGACC GGTTGCCGCA GGATCTGCCC GCCATCGGTT ACGGCCTGGT CGTCGTGCTC
GGCGTGCCGT TGCTGCTGGG AACCCAGCTG CGCTCGGCCT GGCGGCTGAC CGAACAGGCC
GAACAGCGGG CCCGCGCCGA AGCCCAACGC GCCGAGGCGG AGATACGGCG CCGGGCCTCG
GACGCGCGTG CCGCTAGGGC CTCGGAACGG GTCACCATCG CCCGGGAACT CCACGACCTG
GTGGCCCACC AGATCGCCTC GATACTGCTG CGCGTCGGCG TCGCCCGCGA GGTGCTTCCC
GACCTGGGGC AGGCGACGAA GGAGACCCTG GACGACGTGC ACGACTGCGC CGCCACCGTC
CTGGACGACC TGCGCCGCCT GGTGCGGATG CTGCGCTCCG GCGAGGGCAT CTCGCTGATC
GAACCCAAGG GCCTGCGCGA GGCCATCGAG GAGACCACCG AACGCGGGCG GCAACTCGGG
TTGGACATCA CCGCGTCGTT CGACGAGTCC ATCGGTCACA TCGACGCCGT GCGTGCCCTG
ACCGTGCTGC GACTGTGCCA GGAGGGCCTC ACCAACGTCG CCAAACACGG CGGCCCCACC
GCCCGGGTGA GCATCGCGAT CCGGCACGAC ACCGAGGGCG CGATCCGGTT GGAGATCGAC
GACGACGGCG GCGGACGGCA ACCGCAGACC ATAAGCGACG GAAGCGGGTT CGGCTTGATC
GGCATGCGGG AACGCGTGGA ACTGCTCGGC GGGGAACTGG ACGTCGGACC CACATCGGAC
GGTTGGCGGT TGCGCGCGGT CCTGCCGCAA CCCACCGACG CCGTCCCCGC CCCGGCGCCC
GAGCCGCGCC CGGCGGTCGC GTCATGA
 
Protein sequence
MFGSNLQQVF GVRYAPVRML AMAALSAGYL GLRADGVTTA DWLFAAAAVV LGGLASAVPL 
AAAIALAALL AVAATVGGDG PAVMLVKIFA SFALFELAAR RPARWAGIAA VALVVGSLAG
KVDRLPQDLP AIGYGLVVVL GVPLLLGTQL RSAWRLTEQA EQRARAEAQR AEAEIRRRAS
DARAARASER VTIARELHDL VAHQIASILL RVGVAREVLP DLGQATKETL DDVHDCAATV
LDDLRRLVRM LRSGEGISLI EPKGLREAIE ETTERGRQLG LDITASFDES IGHIDAVRAL
TVLRLCQEGL TNVAKHGGPT ARVSIAIRHD TEGAIRLEID DDGGGRQPQT ISDGSGFGLI
GMRERVELLG GELDVGPTSD GWRLRAVLPQ PTDAVPAPAP EPRPAVAS