Gene Snas_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3645 
Symbol 
ID8884844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3876970 
End bp3879105 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content69% 
IMG OID 
ProductMMPL domain-containing protein 
Protein accessionYP_003512396 
Protein GI291301118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTG TGCTGTACCG CCTCGGCAGG AACGGCGCGC GACGTCCGTT TCTGACGCTC 
GCGATCACCG CCGCCGTGGT GGCCGTCATC GGTTTCGTCT CCGCCGGACT GGGCGGGGCT
CCCCACAACA CCGTCGACCT GCCGGGGACA TCCAGCCACG CCGCCACCCA GCTGCTGGAG
CAACGGTTCC CCGACGAAGC CGGCGCGCGG GCCCACATCG CTGCCGACTG GGGCGAAGCC
GACGTGGATG AGAACGCGCT GGACGACACG GTGGCGCGGC TGGAACAGCG CGACGGGGTG
CGCGAGGTTG CGGTGCGGCG CAGCGATTCG GCCAACATCG CCATCGTGGC GGTCAGCTAC
CACCGTCCGG CCACCGAACT GTCGGCGACC GCCGAGACCG ACGCGCTCGA CCGGGCCGCC
ACACCACTGC GCGACTCGGC GGACGCCGTG GCCGTCGGCG GCGAACTTCC CGAATCGGTG
CAGGGCCCCG ACGGTACCGC CGAGGCCGTC GGCGTCGGGG TGGCGCTGCT GATCCTGTTG
TACGCCTTCG GTTTGCTGCT GGCCGCGGGC TTCCCGCTGT TGATCGCGGG CCTGGGAGTC
GGCACCGGCA TGGGCCTGAT CATGCTGATC GCCGGTTTCA CGACCGTCAA CACCGCCACC
CCCACGCTGG GCGCCATGAT CGGGCTCGGC GTCGGCATCG ACTACGCCCT GTTCATCGTG
TCCCGGTACC GCGCCCACCG CCACGCCGGA AACGACTCCG TCGCATCGGC AGCCGTGGCC
ACGGCCACCG CCGGTCACTC GGTCGTCATC GCCGGAGCCA CCGTCCTGGT CGGACTGACC
GGACTGGCCT TGTGCGGGGT GCCGAGCTTC ACGACCATGG GCCTGGCCGC CGGACTGGTC
GTCATCGTCG AGGTGTTGCT GTCCATAACA GTGCTTCCGG CACTGCTGGG CCGCTTCGGG
CACCGGATGC GACGCTCCCG TCGCGACCCC GAACAACCGG CGCGCTGGGC CGCAACCCTG
TCCGCGACGG TCACGCGCCG CCCGACGGCA TGGCTGCTGA CCGCACTCGT GCTGCTGACG
GTCCTGGCCG TCCCGGTCAC CGGCATGCGA CTGGGGCAAA ACGACGCCGG CGCCGAGGCC
GCCGATTCCA CCACCCGACG GGCCTTCGAC ATCGTGGCCG AGGGTTTCGG TCCCGGTGCC
ACCGGCCCAC TGCTGATCGT CGTCGACACC CGCCGCACCG GGACCGCCGC CGTCGCCGAC
ATCCGGGATC GGGTAGCGGG ACTCACGGGC GTGGAACGAC TCACCCCGTC CCGGAAATCC
GACGACGGCA CCGTGACCGT GTTCGAAGCC GTCGGATCCC AACGGCCGCA AAGCCCCGAA
ACCGAACGGC TGGTGCGCGA GGTGACCCGA ACGCTTCCCG ACGGCGCCGA GCTCACCGGT
CCCACCGCCA TCAATATGGA CATGTCGGGT CGGCTGGCGG ACCGGTTGTG GCTGGTGATC
GCGGTCGTGC TGGTGCTGAG TTTCGTACTG CTGGTCTTCA TGCTGCGGTC ACTGCTGATC
CCGCTCAAAG CGGTGCTCAT GAACCTGCTG TCGGTGACCG CGTCCTTCGG CGTGTTGACC
CTGGCCTTCC AGACCCACGC TGGGGCGCGG TTGCTGGGCC TGGACGACCC GGTCCCGATC
GCGGGCTGGG CGCCGCTGGT CCTGTTCGCG ATCCTGTTCG GACTGTCCAT GGACTACGAG
ATCTTCCTGC TCGGCAGGAT CCGGGAGGCC TACCTCGTCT CCGGTGACAA CACCGCCGCC
GTGGTGTCGG GGCTGAGCCA GGCGGCCCGG CTCATCACCG CGACCGCCGC CATCATGGTC
GCGGTGGCCC TGGGCTTCGC CTTCGATTCC TCGGTGATGG TGAAGATCAT CGGCGTCGGC
ATGGCCACAG CGCTGTTGCT GGACGCGACC GTGGTTCGCA TGGTCCTGGT GCCCGCCACC
ATGACGCTGC TGGGCCGCGC CAACTGGTAC CTGCCGAGAT GGCTGGGACG ACACCCAAGT
CAACCCGGCG CTGCCGAACT CGAGCGAAAG TTCGGAGAAG CCGACGCCCG TCCCCGATTA
AGGCAATTAC GTGTTCCGGT CGCGGCGGTG GCGTAG
 
Protein sequence
MSTVLYRLGR NGARRPFLTL AITAAVVAVI GFVSAGLGGA PHNTVDLPGT SSHAATQLLE 
QRFPDEAGAR AHIAADWGEA DVDENALDDT VARLEQRDGV REVAVRRSDS ANIAIVAVSY
HRPATELSAT AETDALDRAA TPLRDSADAV AVGGELPESV QGPDGTAEAV GVGVALLILL
YAFGLLLAAG FPLLIAGLGV GTGMGLIMLI AGFTTVNTAT PTLGAMIGLG VGIDYALFIV
SRYRAHRHAG NDSVASAAVA TATAGHSVVI AGATVLVGLT GLALCGVPSF TTMGLAAGLV
VIVEVLLSIT VLPALLGRFG HRMRRSRRDP EQPARWAATL SATVTRRPTA WLLTALVLLT
VLAVPVTGMR LGQNDAGAEA ADSTTRRAFD IVAEGFGPGA TGPLLIVVDT RRTGTAAVAD
IRDRVAGLTG VERLTPSRKS DDGTVTVFEA VGSQRPQSPE TERLVREVTR TLPDGAELTG
PTAINMDMSG RLADRLWLVI AVVLVLSFVL LVFMLRSLLI PLKAVLMNLL SVTASFGVLT
LAFQTHAGAR LLGLDDPVPI AGWAPLVLFA ILFGLSMDYE IFLLGRIREA YLVSGDNTAA
VVSGLSQAAR LITATAAIMV AVALGFAFDS SVMVKIIGVG MATALLLDAT VVRMVLVPAT
MTLLGRANWY LPRWLGRHPS QPGAAELERK FGEADARPRL RQLRVPVAAV A