Gene Snas_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3643 
Symbol 
ID8884842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3875278 
End bp3875808 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512394 
Protein GI291301116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.609223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCATCTCCGA CGCCAAAACC GCCGCCCGCG TACTTCGCCA ATGCCTCGCC 
GACGACGGCT TCGAGCTGAG TCACAGCCGG GCGCTGGAAA TCGTCGCCCA GCAACTCGGC
TTCGCTGACT GGAACACCGC CAGCGCCAGT CTCACCGCGG CGCAGACAGA CTCCGGTTCC
GCCGTGGCGG TGCTCCGTAT CCACGACACA GCCCTGGCAC GCGGCTTCTA CCTCGACTAC
CTCGGCTTCA CCACCGAATG GGAACACCGG TTCGAGCAAG GCATGCCGGT CTATATGCGC
ATCCGTCGAG GCGAAACCGT GCTCGACCTG TCGGAGCATC ACGGCGATGG CACCCCCGGC
TCGGTGGTGT GGGTGCCGAT CGGTGACCTG CGCTCCTTCC ACGCCGAACT TTCTCGTCGG
GCGCATCCCA ACCTCCGTCC CGGCATCGAA CGCGACGCCC CAGGCGGACC GACGATGGAG
ATCATCGATC CCTTCGGCAA CGTGTTGCGC TTCTGCCAAC CCTCCGAGTG A
 
Protein sequence
MTTTISDAKT AARVLRQCLA DDGFELSHSR ALEIVAQQLG FADWNTASAS LTAAQTDSGS 
AVAVLRIHDT ALARGFYLDY LGFTTEWEHR FEQGMPVYMR IRRGETVLDL SEHHGDGTPG
SVVWVPIGDL RSFHAELSRR AHPNLRPGIE RDAPGGPTME IIDPFGNVLR FCQPSE