Gene Snas_3621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3621 
Symbol 
ID8884820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3854170 
End bp3855159 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content64% 
IMG OID 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_003512374 
Protein GI291301096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCCG CCCATAAACC ACTGCGGCTG GCCGTCACTG CGGGCCTGCT GCTCGCCACG 
GGTGGTCTGA CCGCCTGTTC CGCCGCCGAC GACGGCCTCA AGATCGGCCT GATCACCAAA
ACCGAGACCA ACCCATTCTT CGTCAAGATG AAGGACGGCG CCCAAAAGGC CGCCAAGGAA
GCCGGAGCCG AGCTGACCAC CGCCGCCGGA AAATCCGACG GCGACAACGA AAGCCAGGTC
ACGGCGATCG AGAACATGAT CACCGCCGGA GTCGACGGCA TCCTCATCAC GCCCAACGAC
ACCGAGGCCA TCGTTCCCTC CATCAAGAAG GCCCGCGACG TCGGCATCAC CGTTATCGCC
CTCGACACCC CCACCGAACC CCAAGACGCC ACCGATGCCC TGTTCGCCAC CGACAACGAA
CGCGCCGGCG AACTCATCGG TGAGTACGCC AAGGCGCTGT TGGGCGACAC CAAACCGAAG
ATCGCCACGC TCGACCTGGC ACCGGGCATC ACGGTGGGCA AGTTGCGGCA TGACGGTTTC
CTCAAGGGCT TCGGAGTCAC CGACAAGGAC CCCGCCGTGG TCTGCTCCCA AGACACCCAG
GGTGACCAGG GTAAGGGGCA GACCGCGATG GAAAACTGCC TCCAGTCCGA TCCGGACATC
AACCTGGTCT ACACGATCAA CGAGCCCGCC GCCTTGGGCG CCTACTCCGC GATCGACGCG
GCCGGAAAAA CCAAGGACGT GACCATCGTG TCCGTCGACG GCGGCTGCAC GGGCGTCGAA
GCCGTCAAGG ACGGCAAGAT CGCCGCGACC TCGCAGCAGT ACCCGCTCGA CATGGCCGCC
AAAGGCGTCA CCGCCATCGC CGACAAGGTC AACGACGGCA AGGACGTCTC CGGATACACC
GACACCGGCG TCAACCTCGT CACCGACAAG CCCGTAGACG GCGTCGAGTC CAAGGACGTC
GAATTCGGCC TCGACAAGTG CTGGGGCTGA
 
Protein sequence
MRSAHKPLRL AVTAGLLLAT GGLTACSAAD DGLKIGLITK TETNPFFVKM KDGAQKAAKE 
AGAELTTAAG KSDGDNESQV TAIENMITAG VDGILITPND TEAIVPSIKK ARDVGITVIA
LDTPTEPQDA TDALFATDNE RAGELIGEYA KALLGDTKPK IATLDLAPGI TVGKLRHDGF
LKGFGVTDKD PAVVCSQDTQ GDQGKGQTAM ENCLQSDPDI NLVYTINEPA ALGAYSAIDA
AGKTKDVTIV SVDGGCTGVE AVKDGKIAAT SQQYPLDMAA KGVTAIADKV NDGKDVSGYT
DTGVNLVTDK PVDGVESKDV EFGLDKCWG