Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3621 |
Symbol | |
ID | 8884820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3854170 |
End bp | 3855159 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_003512374 |
Protein GI | 291301096 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCCG CCCATAAACC ACTGCGGCTG GCCGTCACTG CGGGCCTGCT GCTCGCCACG GGTGGTCTGA CCGCCTGTTC CGCCGCCGAC GACGGCCTCA AGATCGGCCT GATCACCAAA ACCGAGACCA ACCCATTCTT CGTCAAGATG AAGGACGGCG CCCAAAAGGC CGCCAAGGAA GCCGGAGCCG AGCTGACCAC CGCCGCCGGA AAATCCGACG GCGACAACGA AAGCCAGGTC ACGGCGATCG AGAACATGAT CACCGCCGGA GTCGACGGCA TCCTCATCAC GCCCAACGAC ACCGAGGCCA TCGTTCCCTC CATCAAGAAG GCCCGCGACG TCGGCATCAC CGTTATCGCC CTCGACACCC CCACCGAACC CCAAGACGCC ACCGATGCCC TGTTCGCCAC CGACAACGAA CGCGCCGGCG AACTCATCGG TGAGTACGCC AAGGCGCTGT TGGGCGACAC CAAACCGAAG ATCGCCACGC TCGACCTGGC ACCGGGCATC ACGGTGGGCA AGTTGCGGCA TGACGGTTTC CTCAAGGGCT TCGGAGTCAC CGACAAGGAC CCCGCCGTGG TCTGCTCCCA AGACACCCAG GGTGACCAGG GTAAGGGGCA GACCGCGATG GAAAACTGCC TCCAGTCCGA TCCGGACATC AACCTGGTCT ACACGATCAA CGAGCCCGCC GCCTTGGGCG CCTACTCCGC GATCGACGCG GCCGGAAAAA CCAAGGACGT GACCATCGTG TCCGTCGACG GCGGCTGCAC GGGCGTCGAA GCCGTCAAGG ACGGCAAGAT CGCCGCGACC TCGCAGCAGT ACCCGCTCGA CATGGCCGCC AAAGGCGTCA CCGCCATCGC CGACAAGGTC AACGACGGCA AGGACGTCTC CGGATACACC GACACCGGCG TCAACCTCGT CACCGACAAG CCCGTAGACG GCGTCGAGTC CAAGGACGTC GAATTCGGCC TCGACAAGTG CTGGGGCTGA
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Protein sequence | MRSAHKPLRL AVTAGLLLAT GGLTACSAAD DGLKIGLITK TETNPFFVKM KDGAQKAAKE AGAELTTAAG KSDGDNESQV TAIENMITAG VDGILITPND TEAIVPSIKK ARDVGITVIA LDTPTEPQDA TDALFATDNE RAGELIGEYA KALLGDTKPK IATLDLAPGI TVGKLRHDGF LKGFGVTDKD PAVVCSQDTQ GDQGKGQTAM ENCLQSDPDI NLVYTINEPA ALGAYSAIDA AGKTKDVTIV SVDGGCTGVE AVKDGKIAAT SQQYPLDMAA KGVTAIADKV NDGKDVSGYT DTGVNLVTDK PVDGVESKDV EFGLDKCWG
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