| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3550 |
|---|
| Symbol | |
|---|
| ID | 8884749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3762431 |
|---|
| End bp | 3764329 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Heat shock protein 70 |
|---|
| Protein accession | YP_003512305 |
|---|
| Protein GI | 291301027 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.149708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAC TGGCGCGACT GGCGATCGAT TTCGGCACGT CGCACACGGT GGCCGTGCTC
GACCCCGGCA CAGGGCTCGG CCAGGCACTA CTGTTCGGAG ACTCTCCCCT GTTGCCCTCG
GCGGTGTACG CCACCGAACC GGGCCAGCTG CTCGTCGGCC GCGACGCCAT CAGGGCGGCC
AAGACGGCAC CGGAGTGCTT CGAACCGAAT CCGAAGCGAC GCATCGACGA CGGTACCGTC
CTATTGGGAT CGCAGGAGTA TCCTGTCGCG ACACTGATCT CGGAGGTACT CAAAGCGGTC
GCCGCCGAGG CCCGACGGGT GGCGGGCGGG CCCCTGGGCG AGGTCGCGGT GACCCACCCG
GCGATCTGGG GCAAGCAGCG GCTGGACGTG CTGCGACAGG CCGCCCGGGA AGCCTGGCTG
GGCGACGTCA CCCTGGTGCC CGAACCCGAA GCCGCGGCGG TGTACTTCAC CAAATCGGAG
GACACCGGCG CGCTGGCCGA GACGGTCGTG GTCTACGACT TCGGCGGCGG CACCTTCGAC
GTGTGCGTAC TGGTGCGCGT CGACGGCCGA TATCAGGTCC GAGCCCAGGC GGGACTCGAC
GACGTCGGCG GCGCCGACCT GGACGCGGCC CTGCTCGCCC ACATGGGACA GACGGCCTCC
GCTGTCGACG CGTCCACCTG GCAGCGCATC CTCCAACCCG ACGGCCCGGC CACCCGCCGC
GCGTTCCGGA CCCTGTACGA GGACATCAAG GCGGCCAAGG AACAGCTGTC CCGCAACGCC
AGCGGCCTGG TCCACATCCC GATGCTCGAC CGCGACTTCC CGGTCACCCG CGACGAGTTC
GAGCACGTCG CCCGCCCGCT GATCGAGCAG ACGGTGAAGC TGACCGCCGA CATGGTGTCC
GCCGCCGGAA TCACCGAGGG CCAACCGCTC GGCCTGTACC TGGTCGGCGG GTCCAGCCGA
GTGCCGCTGG TGTCGACCCT GTTGCACCGC AAACTGCGTC GGGCCCCGGT CATCACCGGC
CAACCCGAGC AGGTGGTGGC CCAGGGCGCG CTGCTGCGGA TGGGTGACCC GAAGTCCTCC
GACGCGCCGC AGGCGCTGCC CATCGTCACC AAGACGTCGC TGACCTCACC CCCGCAGTCC
GGTCCACCGG CGGCGGTGGT GCCGGTGTCG CCGCCACCGG CCCGACAGGC TCCGCCACAG
CGCCAGTCGT CACCACCCCG CCAGCATCCG CAGGTGCGGC CGGCACCGCC CGCGCGGCAG
ACCCCGCCTC GGCAGGCAGC CGCCCCTGCC CGTCCAGCTC CCCCGCCGCA ACGCCAAGTC
CCACAGCAAC GCCAGGCCCC GCCGCCGCCC GCGCCGCGCA AGTCCCGCAA GGGCAGGTAC
CTGCTCCTAG CCGTGGTGCT GCTGCTGGCG CTGGTCACAG GCGTGTACGT GTTCTACGAA
TACGGCTTGA ACGAGGGCGG CGGCCCCATG GACAGCGCCG ACGACGGTTC CGACGTGAAC
GTCAGCGAAG AACTGGCCCC TGAGAGCTAC TCCGAATGCG CCCGCCCTGA CGGCAGCGGC
GATGGCATCC TCGTGCAGAT CTCCTGCACC GACGAGAACG CCGTATACGG GGTGACCAGG
AGCGTTCAGG CCGAAGAAGA GTGCGACGAA GCCACCGAGG AGTACACCGG TCACTTCAAG
GACTCCGAAG AGGTCTTGTG CATGACGGGG CTGTTCGTAC CGACCAGCTG CCTCGACGGA
AGCTTCAACA CCGACAGCTG CGAAGACCCC GAGAACGTGC CCTACGTGAT CCGCGAGGGT
CCGTTCGAGC AGGACCAGTG CGAGGGCGAG TTCGAAGGCA CGGTGAAGCT GTCCGACTCC
GAACAGTTCT ACTGCTACGA CCTCAACGCG ACGACCTAG
|
|---|
| Protein sequence | MTKLARLAID FGTSHTVAVL DPGTGLGQAL LFGDSPLLPS AVYATEPGQL LVGRDAIRAA
KTAPECFEPN PKRRIDDGTV LLGSQEYPVA TLISEVLKAV AAEARRVAGG PLGEVAVTHP
AIWGKQRLDV LRQAAREAWL GDVTLVPEPE AAAVYFTKSE DTGALAETVV VYDFGGGTFD
VCVLVRVDGR YQVRAQAGLD DVGGADLDAA LLAHMGQTAS AVDASTWQRI LQPDGPATRR
AFRTLYEDIK AAKEQLSRNA SGLVHIPMLD RDFPVTRDEF EHVARPLIEQ TVKLTADMVS
AAGITEGQPL GLYLVGGSSR VPLVSTLLHR KLRRAPVITG QPEQVVAQGA LLRMGDPKSS
DAPQALPIVT KTSLTSPPQS GPPAAVVPVS PPPARQAPPQ RQSSPPRQHP QVRPAPPARQ
TPPRQAAAPA RPAPPPQRQV PQQRQAPPPP APRKSRKGRY LLLAVVLLLA LVTGVYVFYE
YGLNEGGGPM DSADDGSDVN VSEELAPESY SECARPDGSG DGILVQISCT DENAVYGVTR
SVQAEEECDE ATEEYTGHFK DSEEVLCMTG LFVPTSCLDG SFNTDSCEDP ENVPYVIREG
PFEQDQCEGE FEGTVKLSDS EQFYCYDLNA TT
|
|---|
| |