Gene Snas_3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3517 
Symbol 
ID8884716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3729129 
End bp3730130 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512273 
Protein GI291300995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.281174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGGT CCGTCTCGGG CGACAGGGCC CTGCTCACCG GAATCCTCGG TGCGGCACTG 
ATCTCGACCT CGGCGGTGCT GGTGAAGCTG GCCGACCTGC CCGCCACCAC CACTGCGGCG
TTGCGCACCG GGTACGCGGT GCCGGTGCTG GCGCTGTTGG CCGTCATCGC CTGGCGCCGA
CGGCCGCTGC CGCGCGACCC GCGCCAGCGG GCCTGGTGCC TGGTGGCCGG AGTGCTGTTC
GCCGGTGCCA CCCTGATGCA GAACCTGGCG GTGGCCCTGA TCGGCGCCGG GATCGCCACC
GTGATCTGCA ATCTGCAGGT CCTGGTGGTC GCCGTGGGCG CGTGGTGGTG TTTCGCGGAA
CGACCGCCGC GACGGCTGCT GCTGGCCCTG CCTCCGGCGC TGCTGGGCGT CGTGATGGTC
TCGGGAATGC TCGGCGGCCA GGCCACCGGC ACCGACCCGA GCCTGGGTGT GTTGGCGGGG
CTGGCCAACT CACTGTGTTA CGGCGCGTTC CTCATGGTCA TGCGGCACGC GCAGCGTTTC
GGTGCGGCGC AACCGGTCGC GGCGCTGCGC GACGTGACCG CCGTGGCCTT CGCGGTGTCA
CTGCTGACGG TGCTGGCCGC CGGGGACGGC GGGATGGCAC CCAGCTGGCC CGCGCACGGC
TGGATGCTGC TGCTGGCACT GGGGCCGCAG GTGTTCGGCT GGCTGCTGAT CACGACGAAC
CTGCCCCGGC TGCCGCTGGC GGTGTCGGGC CTGCTGCTGT TGCTGCAACC GATGCTCACC
ATGGGACTGG CGATGGTCCT CTTGGGAGAG AATCCGTCCA TTGTGCAGCT GATCGGCTGT
GTACTGCTGA TGACGGCGGT GGGCTTCGGC GCCGGAACGA TAGTGTTGCC ACGACCGAAA
GGACGGCAAT GGTTGAAGTC TCCGTCGACG TCGCCGCGGA CGCGGCGGTT CGCGACGACA
TCGTCGCCTG GATCACCCGG TTCCCGCAGG CCGCCGAACT GA
 
Protein sequence
MNRSVSGDRA LLTGILGAAL ISTSAVLVKL ADLPATTTAA LRTGYAVPVL ALLAVIAWRR 
RPLPRDPRQR AWCLVAGVLF AGATLMQNLA VALIGAGIAT VICNLQVLVV AVGAWWCFAE
RPPRRLLLAL PPALLGVVMV SGMLGGQATG TDPSLGVLAG LANSLCYGAF LMVMRHAQRF
GAAQPVAALR DVTAVAFAVS LLTVLAAGDG GMAPSWPAHG WMLLLALGPQ VFGWLLITTN
LPRLPLAVSG LLLLLQPMLT MGLAMVLLGE NPSIVQLIGC VLLMTAVGFG AGTIVLPRPK
GRQWLKSPST SPRTRRFATT SSPGSPGSRR PPN