Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3502 |
Symbol | |
ID | 8884701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3708999 |
End bp | 3712319 |
Gene Length | 3321 bp |
Protein Length | 1106 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | peptidase S8 and S53 subtilisin kexin sedolisin |
Protein accession | YP_003512258 |
Protein GI | 291300980 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.250656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00117601 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCCATAC TGACGGTCAT GACCCGCATG CTAGCCGCGA TCGTTGTCGC CCTACCGATC CTGGCCCCCG CCCCCACAGC CGCGTCACCC GTCGCGGCCG ACACCGCCAT GACCCCAAAC GGCGTCTCCC TCATCACCGG TGAGACCGTC ACCTACCACA AACGCGCCGA AGCCGAACCC GTCGTGACCG TGACCAAACC GCGAGAATCG GTGCGGTACA CGATCCAGAC CACCGGCGAC GACACCTTCG TCATCCCCTC GGACGTCCAC GACGATGTGG ACTCCGGCCG CGTGGACCGG GAACTGTTCA ACATCCCCGG ACTCATCCGC CAAAACCTGG ACGACACCGT CGCCCCACTG ATCGTCGGCT ACGACGCCGA CCTGTCGACC CGCACCACCG CTGAGCGGGC CGAACGGCTG CCCGGCGCCG AGGTGACACG CACCCTGCCG GTCATCGACG CCGTCGCCAT CGACGTCGAT CCCCACCGAA GGGCGGCGTT CTTCGCAGCC GCCGCCGACG ACCGCACGAT CGACCGGATC GGGCTCGACC GCCGGTTGAC CGTCGCACTC GACAAGAGCG TGCCCCGCAT CGGCGCCCCC GCCCTGTGGC AACGCGGCCA CGACGGCAAG GGCGTCACGA TCGCCGTCCT GGACACCGGC ATCGACTCCA CCCACCCCGA CGTCTCCGAC AGGATCACCG CCACCCGGAA CTTCACCGAG GAACCCGACA CCGCCGACGG CCACGGACAC GGCACCCACG TCGCCTCGAT CGCCGCCGGA ACCGGCAGCG CCTCGGACGG CGACTACCGG GGCGTCGCCC CCGGCGCCGC ACTGGTGATC GGCAAAGTCT GCGACTCCGA CGGCCTGTGC CCCGAATCAG CGATCCTGGC CGGAATGGAA TGGGCCGCCC GATCCGGTGC CACCGTGGTG AACCTGAGCC TGGGTACCGG CGGCGGCTCC GACGGCAGAG ATCCACTGTC GACGGCGGTG AACCGGCTGA CCCTGTCCAC CGGCACCCTG TTCGTCGTCG CGGCGGGCAA CTCCGGTTGC GCCCCATGCG TCGGCGCCCC CGGCGCGGCC ACCAACGCGC TGACCGTCGG CGCCGCCGAC GCATCCGACG CCCCGGCGAC GTTCTCCAGT CGCGGTCCGC GACTCCACGA CGCCGCGATC AAGCCCGAGA TCACCGCGCC CGGAACCGAT ATCGTCGCCG CCCGAGCCTC GGGCACCGCC ATGGGCTCGC CAGTGGACGA TGACCACACC TCGGCATCGG GAACGTCCAT GGCCACCCCG CACGTGGTCG GCAGCGCGGC GCTGCTGGCG CAGGCCCACC CCGACTGGAC CTGGATCGAC CTCAAGAAGG CGCTCACCTC CACCGCCAAG GACACCGACG CCGCCGCGTT CGCCGAAGGG GCGGGACGCG TCGACGTCGA CCGCGCCGAC ACCGCCGACC TGACCGGCCC GACGCCGATC CATTTCGGAC GTCAAGCGGG AGTCGGCACC AAGATGTTCT CCTACACCAA CACCACCGAC GCGCCCGTCA CCGTGAAACT GAAGCTGGAC CTGCGCACCT ACACCGGCAA ACCCGCCGCC GACGGCGTCG CCACGATCAA GGACACCACC CTCACCGTGC CCGCCAACGG CAGTGCCCAA GCCCAGATCA CCGTCCATCC CTTCCGCGCC ACCCCCGGCG TGTACGCGGG CACGGTGACC GCCACCGCCG GTGACGCCAC CGTGCGCACC CCGTTCAGCT TCTACAAACC CACCCCCACC GTCCCCGTGA CCATCAAGGT GACCGGCTTC GACGGCAAAC CACTGCCGGG GGACAAGACC TTCCAGCTGG CACGCGGCAA CTCCCTACCC GACGACCCGA TGGCACCCGC CACGATCATC GGCGTGCCGG TCCGCGACGG CGTCGGCACC GCCAAGGTGC CGGTGGGCAC CTACACCGCC TTCGGTCTCG CCCACGAAAC CGGCGCCGAC AAGGCCGCCT GGTTGGCCGA AACGAACGTG ACCGTCACCA AGGCCACCGA CATCACCCTG GACGCCCGCG AAACCGTACC GGCCGCAGTG GACACGAACG AGACCGTCGA CACCCGCAAC CACCAACTCG TCCTGGCCTA CAACTCCACC GCCGGAAGCT GGGGCTCGGC GATCGCCAGC ACCACCAAGA AGCTGTACGC CACCCCGGTC GCGGAAGTCG ACGGACCCGA CCGCCTCACC ATCCAAGCAC TATGGACCCT GACCGGAACC GACAAACCCA CCGTGTACAA CCTGAACTTC AGCCACAAGG ACGGCATCCC CGACTCGCTG ACCTTCGACG CCACACCCGG CAACCTGAAA ACGATCAAGA CCCGCTACCT CGCCGGGCGA TCCGGCCTGA CGCTCCACCA CGCCTGGTTC GCGCTGCGCG GCGACTCGGC GGCCACCATC CTGTTGCCCC GCTTCGAAAC CGCCGCCCCG GTCGCCTACA CCGAATACGT CACGCCCGAC GCGGCGCTGC GATGGAACCG GTGGGTGGAA CTGCGCGACC AGGCGGGCAA CAACTACACG TTGCACGAAT TCAGCTCCGG ACCCGACGGC GCCGAAGACT GGTACAGCGG CCCCATCACA CCCGCCGCAC CCGGCTTCTA CCGCCTGCGC GCCAACGACC ACGACCTCAT CTACCCGACC GGATTCATCT CCGACGGCGA TCTGGACCAT GTCCTGGACG TCAACACCAA GAACTATCCG ATCAAGTGGA AACTGTTCCA AGGCGACAAG CAGATCCCCG GCGCGCCCAC CCCAGGATCG TCGGTGCCGA CCTTCCCGAT CCACGACGAC CAGCCGCTGG ACTACCGACT GGAATCCACC CTCACTCTGC CCGCGACCAG CAAGACCGGC CCAAGCCTGG CCACCCACCG CACCAGCGTC ACAGTAGACA CACAGTGGAC ATTCCGCTCC GGCAAGGCGA CCGGAACCGA CTGTTCCGCC GCCACCGGCG CGAAAGTCTG CGACCGACTG CCGGCCATCC AGCTCGGCTA CGACCTCGGC CTCGACCCGC ACCACCAAGC CCCCGCCGGA CGCGACCACA CCGTGAGCAT CACGCCCCGG CACCCGAACG CCGCCGACAT CGCCGGGTTG AAGCTGTCCT TCTCCACCGA CGAAGGTGAT TCCTGGAAAG ACGCCACCAC CACCGCCGAC GGTGACACCT TCACCGCCAC CATCCCGAAT CCCACCGATC CGGACGCGTA CGTGTGGCTG CGCGTCGAAG CCTGGGACGA CAACGACAAC CGCGTCGTCC AGACCGTCCA CCGCGCCTAC GCGCTGACCG CGTCCGCATA G
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Protein sequence | MAILTVMTRM LAAIVVALPI LAPAPTAASP VAADTAMTPN GVSLITGETV TYHKRAEAEP VVTVTKPRES VRYTIQTTGD DTFVIPSDVH DDVDSGRVDR ELFNIPGLIR QNLDDTVAPL IVGYDADLST RTTAERAERL PGAEVTRTLP VIDAVAIDVD PHRRAAFFAA AADDRTIDRI GLDRRLTVAL DKSVPRIGAP ALWQRGHDGK GVTIAVLDTG IDSTHPDVSD RITATRNFTE EPDTADGHGH GTHVASIAAG TGSASDGDYR GVAPGAALVI GKVCDSDGLC PESAILAGME WAARSGATVV NLSLGTGGGS DGRDPLSTAV NRLTLSTGTL FVVAAGNSGC APCVGAPGAA TNALTVGAAD ASDAPATFSS RGPRLHDAAI KPEITAPGTD IVAARASGTA MGSPVDDDHT SASGTSMATP HVVGSAALLA QAHPDWTWID LKKALTSTAK DTDAAAFAEG AGRVDVDRAD TADLTGPTPI HFGRQAGVGT KMFSYTNTTD APVTVKLKLD LRTYTGKPAA DGVATIKDTT LTVPANGSAQ AQITVHPFRA TPGVYAGTVT ATAGDATVRT PFSFYKPTPT VPVTIKVTGF DGKPLPGDKT FQLARGNSLP DDPMAPATII GVPVRDGVGT AKVPVGTYTA FGLAHETGAD KAAWLAETNV TVTKATDITL DARETVPAAV DTNETVDTRN HQLVLAYNST AGSWGSAIAS TTKKLYATPV AEVDGPDRLT IQALWTLTGT DKPTVYNLNF SHKDGIPDSL TFDATPGNLK TIKTRYLAGR SGLTLHHAWF ALRGDSAATI LLPRFETAAP VAYTEYVTPD AALRWNRWVE LRDQAGNNYT LHEFSSGPDG AEDWYSGPIT PAAPGFYRLR ANDHDLIYPT GFISDGDLDH VLDVNTKNYP IKWKLFQGDK QIPGAPTPGS SVPTFPIHDD QPLDYRLEST LTLPATSKTG PSLATHRTSV TVDTQWTFRS GKATGTDCSA ATGAKVCDRL PAIQLGYDLG LDPHHQAPAG RDHTVSITPR HPNAADIAGL KLSFSTDEGD SWKDATTTAD GDTFTATIPN PTDPDAYVWL RVEAWDDNDN RVVQTVHRAY ALTASA
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