Gene Snas_3499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3499 
Symbol 
ID8884698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3706460 
End bp3707560 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content70% 
IMG OID 
Productoxidoreductase domain-containing protein 
Protein accessionYP_003512255 
Protein GI291300977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.66689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000063824 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGGGG TCGGTGTCGG GGTCATCGGT GCCGGAGTCA TCAGCGACAC CTACCTGGCC 
AACATGACCA GCTTCCCGGA CCTGCGGGTG CTGCGGGTCG CCGACCTGGT CGTCGAACAG
GCCGAAGCCC AGGCTGCGAA GTACGGTGTC CCCGCGGCCG GTTCGGTCGC CGAGCTGCTG
GCGGATCCGG ACATCGACAT CGTGGTGAAC CTGACGATCC CGGTCGCGCA CGCCCCGGTG
TCGACCATGG CGCTGGAGGC CGGAAAGCAT GTCTGGCAGG AGAAACCTCT CGCTCTCGAC
CGCCCGAGTG CCCGCGCGCT CCTGGACCGC GCCCGGGCGT CGGGCCTGCG GGTGGCGTGC
GCGCCCGACA CTGTCCTGGG TGCGGGACTG CAGACCGCCC GCCGCGCCAT CGACAGCGGC
CGGATCGGTG AACCCCTGAT GGGCTTGGCG CTGTTCCAAA GCCCCGGACC CGAGTCGTGG
CACCCCAACC CGGAGTTCCT GTTCCAGGAC GGAGCCGGAC CGCTGTTCGA CATCGGACCG
TACTATGTGA CCGAACTGGT GCAGGTCTTC GGCCCGGTGC GACGTGTCAC CGCCGCCGGT
GGCCGGGCCC GCGACACCCG CGTCATCGGC TCCGGCCCCA AGGCCGGTAC GAGTTTCCCC
GTGACGGTCC CGACCGCTGT CAGCGCGCTG GTCGAGTTCG AACGCGGCGG CAGCGCGCAG
CTGCTGTTGA GTTTCGATTC GGCGCTGTCG CGGGCGGGCA TGGTGGAGGT GACGGGTGTG
GGCGGCACCG CCGTGGTGCC CGACCCGAAC CGCTTCGACG GCCCCACGAC ACTGCTGGTG
CTGGGAAATC CGGAGCCTGA GGTTCTGGAA CCGCAGGGCC ACAACGCGAC CCGGGGCATC
GGTGTCGTGG AACTGGCGCG GGCCATCAGG GCGGGCACCG TGGAGCGGGC CGGTGGCGAG
CTGGCCTACC ACGTCCTGGA CATCATGATG TCCATCGACG AATCGCTGAC TCGGCGCGTG
TCGGTCGACG TGGACAGCAC CGTGAAGGTG CCGCCGCCGC TGCCGATCGA CTGGGATCCC
TACGAACGCA CTGTGGACTG A
 
Protein sequence
MSGVGVGVIG AGVISDTYLA NMTSFPDLRV LRVADLVVEQ AEAQAAKYGV PAAGSVAELL 
ADPDIDIVVN LTIPVAHAPV STMALEAGKH VWQEKPLALD RPSARALLDR ARASGLRVAC
APDTVLGAGL QTARRAIDSG RIGEPLMGLA LFQSPGPESW HPNPEFLFQD GAGPLFDIGP
YYVTELVQVF GPVRRVTAAG GRARDTRVIG SGPKAGTSFP VTVPTAVSAL VEFERGGSAQ
LLLSFDSALS RAGMVEVTGV GGTAVVPDPN RFDGPTTLLV LGNPEPEVLE PQGHNATRGI
GVVELARAIR AGTVERAGGE LAYHVLDIMM SIDESLTRRV SVDVDSTVKV PPPLPIDWDP
YERTVD