Gene Snas_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3466 
Symbol 
ID8884665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3666867 
End bp3667847 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content68% 
IMG OID 
Productpyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha 
Protein accessionYP_003512223 
Protein GI291300945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.54216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0673101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCCC ATCCCGAAGT CGACGCCGGA CATCGCCGGG AACTGTTGCA CCAGATGCTG 
CGCATCCGCC GGTTCGAGGA ACGCTGCGCC GAACTGTACA GCGCCACCAA GATCCGGGGC
TTCGTGCACC TGTGCATCGG CGAGGAGGCG GTCGCCGTCG GAGTACACAA GGCACTCGCC
GACGATGACG CGGTGGTGTC CACGTACCGC GAACACGGCC ACGCGCTGGC CAAAGGCATC
ACCATGGACG CCGTCATGGC CGAGATGTAC GGCAAGGCCA CCGGTTGCAG TCACGGACGG
GGCGGCTCCA TGCACCTGTT CGACCGTGAC GCCCGCTTCT ACGGCGGCAA CGCCATCGTC
GGCGGAGGTC TGCCGCTCGC GGTGGGTCTG GCGCTGGCCG ACACCCGGCT GGGACGCCGC
CAGGTGACCG CGTGTTTCTT CGGCGACGGG GCCGTCGCCG AGGGCGAATT CCACGAAAGC
CTCAACCTCG CCGCGCTGTG GCGGCTGCCG GTGTTGTTCT GCTGCGAGAA CAACCAGTAC
GCCATGGGGA CCCCGTTGCG CCGGGAGCAC GCCAACACCG ATCTGGGAGC CCGCGCCGTC
GGTTACGGCA TGCGGTCGAT GGAGGTGGAC GGCATGGACG TCCTGGCCGT GGAGGCCGCC
GCCCACGAAG CGGTGGCCCA CATCGGCAGA CATCGGGAAC CGGTGTTCCT GGAACTGCGC
ACCTACCGGT TCCGGGCGCA CTCGATGTAC GACCCCGACC GGTACCGGGA CAAGACGGAG
ATCGAGTCCT GGAAGCGGCG CGATCCGATC CCGGCTCTGG CCGCGTCGTT GCGAGCCACG
GCGGACCTCA GCGACTCCGA TATGGACAAG ATGGAGTCCG AGGTCACCGC CGAGATCGAC
GGTGCCGTGG CCGCCGCGGA GGCGGCACCA GTGGAGCCGG AGTCCGAACT GACCCGGCAC
GTCTACACGG AGCGTGCGTG A
 
Protein sequence
MTAHPEVDAG HRRELLHQML RIRRFEERCA ELYSATKIRG FVHLCIGEEA VAVGVHKALA 
DDDAVVSTYR EHGHALAKGI TMDAVMAEMY GKATGCSHGR GGSMHLFDRD ARFYGGNAIV
GGGLPLAVGL ALADTRLGRR QVTACFFGDG AVAEGEFHES LNLAALWRLP VLFCCENNQY
AMGTPLRREH ANTDLGARAV GYGMRSMEVD GMDVLAVEAA AHEAVAHIGR HREPVFLELR
TYRFRAHSMY DPDRYRDKTE IESWKRRDPI PALAASLRAT ADLSDSDMDK MESEVTAEID
GAVAAAEAAP VEPESELTRH VYTERA