Gene Snas_3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3462 
Symbol 
ID8884661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3661188 
End bp3662915 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content71% 
IMG OID 
ProductH(+)-transporting two-sector ATPase 
Protein accessionYP_003512219 
Protein GI291300941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.127491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.543302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCAGA CCTTCGGACG GGTGCGGCGG GTATGCGGCC CGCTGGTCGA CGTCGATCTC 
AGTGCGCCCG TGGCGATGAA CGAGACGGTG TGGCTGGGAA CCGAGGGTAT CCCCGGTGAG
GTCGTGGCGG TGCGGGACGA CATCGCCACG GTGCAGGCGT ACGAGGACAC CGGCTGCCTG
GCCCCGAAGG CTGTGGTCCG CACCGGCGGA TCGCCGCTGT CGGCTCCGCT GGGCCCGGGA
CTGCTGGGCG GCGTCTTCGA CGGTCTGCTG CGTCCGCTGT CCGACGCCCC GGACTTCCTG
GGTCGCGGGA CCGCCGCACC GTCCTTCGGA TCCCGACCCT GGTCGTTCGA TCCACTCGCG
ACCGTGGGAG CCCGGGTGGG TCCCGGCGAC GAACTCGGTG TGCTGCGCGA CTCCCGCCCG
GTCAAACACC CGGTCCTGGT TCCACCCACG CTTGCCGGGG AACTCGAGTA TCTGGCCCCC
GAGGGCCGAT ACCCGGCCGA GACGGTGATC GCGCGGGTTG CCGGTCAGCC GGTCCACATG
GCACAACCAT GGCCGGTGCG CCGCCCCCGT CCGGTCCGAA ACCGGCTGGA ACAGACCGCT
CCCCTCCACA CCGGACAGCG CGTCCTGGAC CTGCTGTTCC CGGTGCCGCG CGGCGGCTCC
GCCGCGGTTC CCGGCGGCTT CGGCACCGGC AAGACCGTCC TGTTGCAGCA GGTGGCCAAG
TGGTGCGACG CCGACGTGAT CGTGTACATC GGATGCGGTG AGCGGGGCAA TGAGATGGCC
GAAGTAGTGG CGGAACTGTT GTCGCTCACC GATCCTCGCT CCGGCGGCAG GTTGGCCGAC
CGCACCGTGG TCATCGCCAA CACCTCGAAC ATGCCCATGA TGGCCCGCGA AGCGAGCATC
CACACCGGGA TGACCGTCGC CGAGTACTTC CGTGACATGG GTCTGCACGT GGTGCTCATC
GCCGACTCCA CCTCCCGGTG GGCGGAAGCG TTGCGCGAGT TCGCCTCCCG GAACCGGGAA
CTGCCCGCCG AGGAGGGCTA CCCGGCCGGG CTGGCCTCGG CGCTGGCGGC GTTCTACGAA
CGTGCCGGAG TGGTGGAGAC CCTTGGCGGC CGCATCGGAT CGGTGACCGT GGTGGGGGCG
GTCTCCCCAC CCGGCGGGGA CCTGACCGAG CCGGTGACCG CCTACACCGA GCGGTTCGTC
CGCTGCCGCT GGACTCTGGA CCGCGACCTG GCCTATGCCC GGCACTATCC GTCGGTGTCG
TGGTCGGGTT CGTTCTGCCG GGATGCCGAG ACCATCGGTG CCTGGCACGC CGCCCACGGG
GATCGCGCCT GGTGGGCCCG GCGCGAACGG CTGACGACGG TGCTGTCCGA AGCCGACAGG
CTCTCCGCGC TTGCCGAGCT CGTCGGCACG ACGGCGCTGC CGCCGCACGA ACGCGTGATC
CTGCTGGGCG GCAGGTTGAT TCGTGAGGCG GTGCTACAGC AGAGCGCGCT GTCGGCGACG
GACGCCCACT GCACCACCGC CAAGACCGTG GCGCTGGCCG AGGCGGTGAT CGCGGTGATC
GATGCCGCTC AAACCGCCGT CACCACGGGT GTCCCCGCCG CCGACGTGGA GGGGGCCGAC
TATTCGCCGC TCGTGCGGGC GCGTGAGGAG TCGGGCCCCG ACGACGTCGA GGGAGTGCGA
GCTCGCCGGG ACGTGGTGCT GGAACGTCTG AAGGAACTGG CATCGTGA
 
Protein sequence
MNQTFGRVRR VCGPLVDVDL SAPVAMNETV WLGTEGIPGE VVAVRDDIAT VQAYEDTGCL 
APKAVVRTGG SPLSAPLGPG LLGGVFDGLL RPLSDAPDFL GRGTAAPSFG SRPWSFDPLA
TVGARVGPGD ELGVLRDSRP VKHPVLVPPT LAGELEYLAP EGRYPAETVI ARVAGQPVHM
AQPWPVRRPR PVRNRLEQTA PLHTGQRVLD LLFPVPRGGS AAVPGGFGTG KTVLLQQVAK
WCDADVIVYI GCGERGNEMA EVVAELLSLT DPRSGGRLAD RTVVIANTSN MPMMAREASI
HTGMTVAEYF RDMGLHVVLI ADSTSRWAEA LREFASRNRE LPAEEGYPAG LASALAAFYE
RAGVVETLGG RIGSVTVVGA VSPPGGDLTE PVTAYTERFV RCRWTLDRDL AYARHYPSVS
WSGSFCRDAE TIGAWHAAHG DRAWWARRER LTTVLSEADR LSALAELVGT TALPPHERVI
LLGGRLIREA VLQQSALSAT DAHCTTAKTV ALAEAVIAVI DAAQTAVTTG VPAADVEGAD
YSPLVRAREE SGPDDVEGVR ARRDVVLERL KELAS