Gene Snas_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3450 
Symbol 
ID8884649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3652628 
End bp3653206 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512207 
Protein GI291300929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.862803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTT GGCGCTTGGT CACCGATGCC GCGAGATTCG CGCGGCTGTT GAGCCTCGAC 
GACAACCCGT TGCGGCGCGA AGTGGATCGC GTCGAGGCTA TGGCCGCCCG CTTCGTCATT
CTCATCGTGG CGGCACTGCT GCCGGTGTGC GTATGGCTGG GGATGAGGAT CCACGAGGAC
GGTCTGGCCA CCATGGAATC TCAAGCCCTG ACGCACTACC AGGTAACGGC GGTGTTGACG
CATGACATCC AGCCCGCCGT GGCAACGTCC TCGTACCAGC AACGCTGGGG TGAGGCGCGC
TGGCAGACAC GTCACGGCAT CGAGGACAGC GGACGCGTCA AAGCCCCGGC GGGCGCCAGG
GCTGGCGACA CGGTCACGAT CTGGCTTGAC GGCGACGATC AACTCGCCGA GCCGCCGTTG
ACGCGGCAAC AGGCGAGCGG ACGGGCCGTC TTCGCGGCCG TCTTCGCCTA CATCGGCGTC
GTCGAACTCG GATTCGGGGT GTGCTGGCTG GTGCGACGGC GCCTCGACCG AATCCGGATG
CGTTCATGGG AGACGCAATG GTCCCGGTTC GCCTCGTGA
 
Protein sequence
MIRWRLVTDA ARFARLLSLD DNPLRREVDR VEAMAARFVI LIVAALLPVC VWLGMRIHED 
GLATMESQAL THYQVTAVLT HDIQPAVATS SYQQRWGEAR WQTRHGIEDS GRVKAPAGAR
AGDTVTIWLD GDDQLAEPPL TRQQASGRAV FAAVFAYIGV VELGFGVCWL VRRRLDRIRM
RSWETQWSRF AS