Gene Snas_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3448 
Symbol 
ID8884647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3647392 
End bp3650088 
Gene Length2697 bp 
Protein Length898 aa 
Translation table11 
GC content71% 
IMG OID 
ProductCoA-binding domain-containing protein 
Protein accessionYP_003512205 
Protein GI291300927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.401225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.714388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CCAACCCGAC CAAGGACGCG TCGAGGCGGG CACTGACCCT TGACGGGAGG 
ATCGTGTCGA TCCGGCCGGT GCGGCCCGGT GACGCGGCGG GCCTGACCTC CCTGCACGAC
ACCGCCGACA CCCGCAGCAT CAAACTCCGG TTCTTCGCGC TGGGCAAGGA CACCGTCCCC
CGGGAGGTGG AACGGTTGAC CCGTCCGCCC GGCGACGACT TCGCCGCCCT GGTCGCCGTC
GACCACGGCC GCATCGTCGG TGTGGCCTCC TACGAGCGAG AACCCGGCGC GAGCCGGGGT
GAGCTGGCGG TGTTCGTCGC CTCGGCGCAC CACGGCCGCG GCATCGCCAC CCTGCTGCTG
GAGCACCTCA GCGTCGAAGC GCACCGCAAC GGCCTCACCC AGCTGGAGGG CAAGGTGTTG
CTGAACAACA CCGCCATGCT GAAAGTCATT TGCGGGCTGT CGGCGGACGG GCTGTCGCCC
GCGATCGGCA ACGTCGTGGA CTTCACGCTG CCCACCAGCT TCAGCGACCG TGAACTGTCC
GCTGTCGACT TTCGCGGCCG CTCGGCCCAG CAGCGTTCGC TGGCGCCCCT GATGACACCG
CGCACGGTGG CCGTCGTCGG TGCCGGACGG CGGCCCGGCG GCATCGGCCA CGAGATCCTG
CGCCAGATCC TCGAATACGA CTTCACCGGC TCGGTCTACC CGATTCACCC GCACGCCGAC
ACGATCGCCG GACAACGCTG CTACAAGTCC CTGGACGAGG TCCCCGCCGC CGTCGACCTG
GTGATCGTCG CGGTCCCCGC CGCGGCGGTC GCCGATGTCA TCGACGAGGC CGGGCGCGCC
GGTGCCCGGG CCGCGGTCGT GATCAGTTCC GGCTTCGCCG AGATCGGCGA GGCCGGAGTC
GGCGCGCAGG CGGAACTGGT GAACCGGGCC CGGCGTCACG ACATGCGCCT CGTCGGCCCC
AACTGCCTCG GATTCATCAA CACCGACCCA CGGGTGCGGC TGGCGGCGAG TTTCGCCGTC
GACGTCCCCG AACCCGGAGG ACTGGCGGTG GCCTCGCAGT CGGGCGCGGT GGGTATCGCG
GTGCTGCATC ACGCGCGCGG TGCCGAACTG GGGATCCGCT CGTTCGTGTC CCTCGGCAAC
AAAGCCGACG TCAGCGGCAA CGACCTGCTG TCGTACTGGT TCGACGATCC CGACTGCCGG
GCGGCGGCCC TGTACCTGGA GTCCTTCGGC AACCCGCGAC GGTTCGCGCG GGTGGCGCGG
GCGTTCGCCA GGCAGAAACC GATACTCGCG GTCAAGAGCG GACGGTCCAG CGGCGGCCGT
CGTGCCGGGG CGTCCCACAC CGCCGCCGCG GCGGCGGCCA ACACCACGGT GGATTCGCTG
TTCGAACAGT CCGGGGTGAT CCGCACCGAC ACCCTCGGTG AGATGATCGA CGCGGCCCGA
CTGCTGTCCG AGCAGCCGTT GGCGGCGGGG AACCGGATCG CGATCGTCGG CAACGCGGGC
GGCATCAACG TGCTGGCCGC CGACAGCGCC GAGACCGCCG GACTGACCTG CCCGCAGCTG
TCACCCCCGC TGGCGGACCG ACTGCGTGCC GATCATCCCG CCGTCGTCAC CACCGACAAT
CCCATCGACC TGGGCGCGGC CACCACACCG GCGGCCATGC GCGACACCAT CGTGACGGTG
GCCGACAGCG GCGAGACCCA CGCCATGGTC GTGGCCTTCG CCGCGTCCCG TTCCACTGAC
GTACCCGGCT GCCTGCAGGC CATCGCCGAC GCTGCCGACG CCGCGCCCGA CACACCGATG
GCCGTGGTCC TGATCGGTGT CACCGACGCA CCGGCCACAC TGGGCAAACG ACGGGTCCCC
GTGTTCGACC TTCCCGAACG CGCGGTGGCC GCACTGGGGC GAGCCGTCGG CTACGCCGAA
TGGCGGCGCC AGCCCCTGGG CGAGTCCCCG CAACTGTCCG ATATCGACCA ACCTGCCGCC
CGGTCGCTCG TCGACGAGGC GCTGCGCACC GGCGGCGGCT GGCAGAACGC CGAATGGTCG
CGCGGACTGC TGGCAAGCTA CGGCATTCCC CACGTCGAAA CCCGCTTCGC CACGTCCGTA
CACGAAGCCG TCGCGGCGGC CGATGCCATC GGCTTTCCCG TGGCGCTCAA GGCCGACGAT
CCGACGATGG TCCACAAGAC CGAACGCGGA GCCGTCCACC TGGGGCTCGA CTCGGCCGCC
GCCGTCAAGA GCGCGTACCT GGCCATAGGC AACGCGCTGC ACACCTCCGT GCCCCGGGTC
GCCGTGCAGC CCATGGTGAC CGGCACGGTC GAACTCATCG CCGGTGTCAC CCACGACCGG
CAGTTCGGGT CGGTCGTGAT GCTGGGACGG GGCGGAATCC AGACCGAACT GTGGGACGAC
AACGCCTTCC GGCTGTTGCC GCTGACCGAT CTGGACGCCC GGCGGATGTG GCGCTCGTTG
CGCACGGCAC CTCTGCTGAC GGGGTATCGC GGCAGTCAGC CCGTCGACAC CTATCGACTC
GAAGACCTGA TGCTGCGGCT GGCGCGGCTG GCCGAGGACT TCCCCGAACT GGCCGAACTG
GACATCAACC CGCTGCTGGC CGGTCCCGGG CTGCTGGCGG CCGTCGACGT CAAGGTCAAC
GTCGCCGCCA CCGACACCGG CGCCGAATGG ATGCTGCCCA CCCTGCGAGA ACCGTGA
 
Protein sequence
MSDTNPTKDA SRRALTLDGR IVSIRPVRPG DAAGLTSLHD TADTRSIKLR FFALGKDTVP 
REVERLTRPP GDDFAALVAV DHGRIVGVAS YEREPGASRG ELAVFVASAH HGRGIATLLL
EHLSVEAHRN GLTQLEGKVL LNNTAMLKVI CGLSADGLSP AIGNVVDFTL PTSFSDRELS
AVDFRGRSAQ QRSLAPLMTP RTVAVVGAGR RPGGIGHEIL RQILEYDFTG SVYPIHPHAD
TIAGQRCYKS LDEVPAAVDL VIVAVPAAAV ADVIDEAGRA GARAAVVISS GFAEIGEAGV
GAQAELVNRA RRHDMRLVGP NCLGFINTDP RVRLAASFAV DVPEPGGLAV ASQSGAVGIA
VLHHARGAEL GIRSFVSLGN KADVSGNDLL SYWFDDPDCR AAALYLESFG NPRRFARVAR
AFARQKPILA VKSGRSSGGR RAGASHTAAA AAANTTVDSL FEQSGVIRTD TLGEMIDAAR
LLSEQPLAAG NRIAIVGNAG GINVLAADSA ETAGLTCPQL SPPLADRLRA DHPAVVTTDN
PIDLGAATTP AAMRDTIVTV ADSGETHAMV VAFAASRSTD VPGCLQAIAD AADAAPDTPM
AVVLIGVTDA PATLGKRRVP VFDLPERAVA ALGRAVGYAE WRRQPLGESP QLSDIDQPAA
RSLVDEALRT GGGWQNAEWS RGLLASYGIP HVETRFATSV HEAVAAADAI GFPVALKADD
PTMVHKTERG AVHLGLDSAA AVKSAYLAIG NALHTSVPRV AVQPMVTGTV ELIAGVTHDR
QFGSVVMLGR GGIQTELWDD NAFRLLPLTD LDARRMWRSL RTAPLLTGYR GSQPVDTYRL
EDLMLRLARL AEDFPELAEL DINPLLAGPG LLAAVDVKVN VAATDTGAEW MLPTLREP