Gene Snas_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3440 
Symbol 
ID8884639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3639460 
End bp3640506 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content68% 
IMG OID 
Productmannosyltransferase 
Protein accessionYP_003512197 
Protein GI291300919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.106882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.942853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCG ACGAGGACGG TGTGGCCGTG GCGCCCATGC TGCGACTGGA TCACCTGCGA 
CGATTGACCG ACGAGCGGGG GATCATCCAG TTCGCCCGCT TCGACAAACC CGATCGGGGC
TCCGGCTACT GTGTCGACGA CGTGTCCCGG TTGGCGATCG TCGCCGCCCG GTTCCTGCGG
CTCGGCTGGG CCACCGAGAC CGTCGGCACC TGGATCGCCA CGAGTATCGA CTTCCTGGAG
CGATCCTTCG GCGAGACCGC GGGCCTGTTG CGCAATGTCG CCGACAGCGA CGGGGAGTGG
ACCGACGAAC CGCACGCCGG TGATCACGTC GGACGAGCAT TGTGGGCGCT CGGCGAGCTG
TACGCCGCAC CGGTTTCCGG CACGGTTCGG CACCGAGCGG CGGCCTTGCG CGGCCGGCTG
CGCCCCGGCG TACACCAGCT GTCGTTGCGG GCGACCGCGT ACGCCGCCCT GGGTTTGTGT
GAATCCGGGC CGCTGTGCGC CACCGCGTAC TACCTCGACG CGAGACTGCG ACGGTCGGTG
GCGCCGAACT GGTACTGGTT CGAGCCGATG CTGGCCTACG ACAACGCCCG GCTGCCGCAG
GCACTGCTGG CGGCGGCCGG GCGGTTGCGC GAACCCGGGA TGACACACCG GGCGCTGTCG
GCACTGGACT GGTACTGCCG ACAGGTCCAC ATCGACACTG GACCGCTGCG TTGCGTCGGC
AACACCTGGC GGCGGCGCGA CACCGCCAGG CTCGGCCATG AGGGCGACGA ACAGCCGATC
GACGCGGCCG CGCTCGTCGA ATGCCTGGTG GACGCGTACG TCCACACCTC CTCGCCCCGG
TACGCCCGGT TGGCGCTGAG GTGTTTCGGC TGGTTCCTGG GCGACAACGC CCACGGTTTG
AGTCTGTACG ATGCGTCCAC CGGAGGATGC CGAGACGGGG TGGGGCGACA CGGCGTCAAC
GAGAACCAGG GTGCGGAGTC CACTCTGGCG TACTATCAGG CATTGTCGCG GTTGGTGGAA
GCCAGATTGG TGACGCTGTC ACACTAG
 
Protein sequence
MSFDEDGVAV APMLRLDHLR RLTDERGIIQ FARFDKPDRG SGYCVDDVSR LAIVAARFLR 
LGWATETVGT WIATSIDFLE RSFGETAGLL RNVADSDGEW TDEPHAGDHV GRALWALGEL
YAAPVSGTVR HRAAALRGRL RPGVHQLSLR ATAYAALGLC ESGPLCATAY YLDARLRRSV
APNWYWFEPM LAYDNARLPQ ALLAAAGRLR EPGMTHRALS ALDWYCRQVH IDTGPLRCVG
NTWRRRDTAR LGHEGDEQPI DAAALVECLV DAYVHTSSPR YARLALRCFG WFLGDNAHGL
SLYDASTGGC RDGVGRHGVN ENQGAESTLA YYQALSRLVE ARLVTLSH