Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3433 |
Symbol | |
ID | 8884632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3633256 |
End bp | 3634125 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | UspA domain-containing protein |
Protein accession | YP_003512190 |
Protein GI | 291300912 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.604274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGA CGAAAGTCAA TCCCGTTGTC GTCGGTGTCG ACGGTTCCAT CGCCGGTTCA CGCACCGTCC GATTCGCCGC CGGTGAGGCA CTGCTGCGAG GCCTGCCGCT TCGGGTCGTG CACGCGCGAA CCTGGTCGGC CTACTACGGC GATCCCGCCT CGGGAGGCAT CTACACCGCC CCGCTGCCAC CCGACGCGGA AAACCGGCGC ATCGTCGACG AAGCCGTCAC GATGGCTCGC CGCGCGCATC CCGACCTGAG GGTTTCGGGC GAAGTCATCG ACGGCAGCGC CGCCGTCGCG CTCGTCGACG AGTCCGAACA CGCCGCCCTG ATCACGGTGG GAGCCAGAGG CCGCGGCGGC GTCCTGGAGC TGATGCTGGG GTCAGTTGCC GTGGATGTGG TGACCCGCGC CCGCTGCCCG GTCATGCTGG TACGGGGTGA GGAGGACATC GTCAGCACGG TGGTGGTCGG CGTCGACGGC ACCCCGATCT CACGGGAGGC CCTCGGTTTC GCGTTCGCCG AGGCGGCGGC GCGTCAGGTG CCACTGCACG CCGTTCACGC GTGGTCCGCC GCGCCGAACG ACGCGACAGC GGAAGAAGAC GATCGACAAC GCACCGAACG TCTACTGGAG AGCTGGATGA GCCAGTGGCA GGACACGTAC CCGACGGTGG AGACCACGGC CCTCCCAATC CAGTCCACCG ACGTCACCAC CACCTTGGTC GACGCGTCCG CGAAGGCCTC GCTGCTCGTG GTCGGCTCCC GGATGCGCGG AGAACTACGC GCCCGGCTAC TGGGATCCAC GGCTTTCGCC CTGGCCCACA CCAGCAAATG TCCGCTGGCG ATTGTTCGCG CTTCCGGGCA ACATCACTGA
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Protein sequence | MNTTKVNPVV VGVDGSIAGS RTVRFAAGEA LLRGLPLRVV HARTWSAYYG DPASGGIYTA PLPPDAENRR IVDEAVTMAR RAHPDLRVSG EVIDGSAAVA LVDESEHAAL ITVGARGRGG VLELMLGSVA VDVVTRARCP VMLVRGEEDI VSTVVVGVDG TPISREALGF AFAEAAARQV PLHAVHAWSA APNDATAEED DRQRTERLLE SWMSQWQDTY PTVETTALPI QSTDVTTTLV DASAKASLLV VGSRMRGELR ARLLGSTAFA LAHTSKCPLA IVRASGQHH
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