Gene Snas_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3420 
Symbol 
ID8884619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3624161 
End bp3624640 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512177 
Protein GI291300899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.82049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0336552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGA CCACACCGGA CGTGATCACC ACACGCCCCG TCGCGCACGT CATCGGCGGC 
CGCGCCGACC CCAACGACGA CGACTGGAAC ACCGAGACGG CCACCATCCG CTTCGACGCC
ACCCAGTTCG CCCCCGAAGC CCTAGCCGGA CTAGACGCGT TCTCACACGT AGAAGTGATC
TTCCGATTCC ACCGCACCTC CCCCGACCGC GTCAACACCG GCGCCCGCCA CCCGCGCGGC
AACCCCGACT GGCCCCTGGT CGGCATCTTC GCCCAACGCG GCCGCGACCG CCCCAACCTG
CTCGGCGTCT CCCGCTGTCA GCTCCTGTCC GTCAACGGCC TGGACGTCCA CGTCCGCGGC
CTGGACGCCA TCGACGGCAC CCCCGTCCTC GACCTCAAGC CCTACATGAC CGAGTTCGGT
CCCCAAGGCG AAGTCACCCA GCCCGCCTGG GCCACCGACC TCATGCGCCA CTACTACTGA
 
Protein sequence
MESTTPDVIT TRPVAHVIGG RADPNDDDWN TETATIRFDA TQFAPEALAG LDAFSHVEVI 
FRFHRTSPDR VNTGARHPRG NPDWPLVGIF AQRGRDRPNL LGVSRCQLLS VNGLDVHVRG
LDAIDGTPVL DLKPYMTEFG PQGEVTQPAW ATDLMRHYY