Gene Snas_3415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3415 
Symbol 
ID8884614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3617597 
End bp3618805 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512172 
Protein GI291300894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.71607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00737957 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACTGTGA AACCCCGACG AATCGCGTTG CTGGCCGCGG TGACCGCGGC GGTCGTCGCC 
CTCCCGGCGT ACATGGCCGT CGCCGACGAC AACGTCGTCG CCAAGAAGGC CGAGCAGGTC
GCGCCCGGCG TGACCTACGA GAAGAAGACC ATCTCGACCC CGCACGGCAA GTCCATCGGC
CATATCCTCA CCGTGGACCT CACTCGCGAG GACGTCGAGG TCGGGCTGCT GACGCCCGGT
CCGGTGGCCG CGACCGGTGT CGTGACGTCG CTGGCCGACC GGGTCAAGGC CGTGGCCGGA
GTCAACGGCG ACTTCTTCAA CATCGGACAG ACCGGCGCCG CCGTCGGCCC CGAGATCCTG
GACGGCAAGG ACCGTAAGGG CCCGGTTCCC GGCAAACAAC GCCACGGGCC GACACCCCCG
CCCGGAACCG ACAACGACAG CGTCTTCGGC ATCACCAAGG ACGGCAAGAC GGTCATCGAC
CGGCTCAACG TCGACGGCAA GGCCACCACG GCCGCGGGCA GCTTCGAACT GAAGGGCCTC
AACCAGTACG CCATCACCGT CGACGGCGTC GGGGTGTTCA ACGCCGACTG GGGCAAGACC
TCCCGCAAGC GCGCCACCTG CGGTACCGAC GACGACCGCG ACGCCCCGTG CAGCGAACAG
ACCAAAGAGG TCGAGATCGT CGACGGCAAG GTCACCCGGG TGTCGGACGC TCCCGGCGAG
GGCCAGATCG CCAAGGACGC CACGGTCCTG CTCGCCCGTG ACAAGGGCGT CGAGCACCTC
AACGGACTGT CCGAAGGCGA CGAGGTCAAC GTCGACTACC AGCTGGCCAG TGAGGACGGT
GCCGACCTGG ACACCGCGCT GGGCGGTCTG ATCCTCATCG ACGACGGCAC GATGCTCGAC
CTCAACGACG ACGCGGCCAC GCTGGCGCCG CGCACCGCCG TGGGTTCCAA CGCCGACGGC
TCCAAGCTGT ACATGGTGGC CGTCGACGGC CGCAGCTCCA CCAGCGTCGG CGCCACCGTC
AAGTCGATGG CCGACATCAT GGTCAACCTG GGTGCCGACC ACAACGTCAT CAACCTCGAC
GGTGGTGGCT CGACCACCCT GGTCGCCCGC AAGGCCGGGA ACACCGCCAC CAGCGTCCGC
AACACCCCCT CCGACGGCTC GCAGCGCAAG GTCGCCAACG GCCTGGGAGT GTTCACCAAA
GCCGCCTGA
 
Protein sequence
MTVKPRRIAL LAAVTAAVVA LPAYMAVADD NVVAKKAEQV APGVTYEKKT ISTPHGKSIG 
HILTVDLTRE DVEVGLLTPG PVAATGVVTS LADRVKAVAG VNGDFFNIGQ TGAAVGPEIL
DGKDRKGPVP GKQRHGPTPP PGTDNDSVFG ITKDGKTVID RLNVDGKATT AAGSFELKGL
NQYAITVDGV GVFNADWGKT SRKRATCGTD DDRDAPCSEQ TKEVEIVDGK VTRVSDAPGE
GQIAKDATVL LARDKGVEHL NGLSEGDEVN VDYQLASEDG ADLDTALGGL ILIDDGTMLD
LNDDAATLAP RTAVGSNADG SKLYMVAVDG RSSTSVGATV KSMADIMVNL GADHNVINLD
GGGSTTLVAR KAGNTATSVR NTPSDGSQRK VANGLGVFTK AA